Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AP006245.2-201ENST00000522004 300 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC126323.4-201ENST00000566935 234 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC079171.1-201ENST00000568788 914 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 RPL7AP69-201ENST00000595306 806 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 VN1R90P-201ENST00000595717 726 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 VN1R88P-201ENST00000596787 292 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC011453.2-201ENST00000603737 729 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL591222.2-201ENST00000604443 754 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC069545.1-201ENST00000605671 358 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL451074.6-201ENST00000608512 729 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC009163.6-201ENST00000612367 342 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC121761.2-201ENST00000617300 689 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 CASC19-222ENST00000641321 1173 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 HSPD1P9-201ENST00000420325 1636 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 ECM1P2-201ENST00000503354 1577 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC007996.1-201ENST00000620414 2821 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC100757.1-201ENST00000616872 1835 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL442128.2-201ENST00000620246 1824 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AL034549.2-201ENST00000618285 3373 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AC106872.5-201ENST00000508856 1416 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AC000374.1-201ENST00000434698 1745 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.78□□□□□ -1.8
LITAFQ99732 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.78□□□□□ -1.8
LITAFQ99732 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LITAFQ99732 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.78□□□□□ -1.8
LITAFQ99732 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.78□□□□□ -1.8
LITAFQ99732 AC104623.2-202ENST00000623477 4002 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.78□□□□□ -1.8
LITAFQ99732 CASC19-246ENST00000641625 1606 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LITAFQ99732 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.78□□□□□ -1.8
LITAFQ99732 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 OR56B2P-201ENST00000317102 954 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.78□□□□□ -1.8
LITAFQ99732 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC3.78□□□□□ -1.8
LITAFQ99732 MIR130A-201ENST00000385274 89 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.78□□□□□ -1.8
LITAFQ99732 RPL21P67-201ENST00000402896 478 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 PPIAP9-201ENST00000403866 498 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 NUDT19P3-201ENST00000404698 555 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AL136131.1-201ENST00000406079 803 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.78□□□□□ -1.8
LITAFQ99732 RN7SKP144-201ENST00000411108 279 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LITAFQ99732 RPL12P9-201ENST00000412942 488 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC3.78□□□□□ -1.8
LITAFQ99732 MICG-208ENST00000416822 132 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.78□□□□□ -1.8
LITAFQ99732 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC3.78□□□□□ -1.8
LITAFQ99732 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LITAFQ99732 AP003385.1-201ENST00000426387 893 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.78□□□□□ -1.8
LITAFQ99732 FAM96AP1-201ENST00000430879 482 ntBASIC3.78□□□□□ -1.8
LITAFQ99732 USP9YP31-201ENST00000431405 881 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms