Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MIR1-2-201ENST00000384961 85 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 MIR1275-201ENST00000408770 80 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC018880.1-201ENST00000418898 1319 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 GAPDHP57-201ENST00000424400 585 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 RPL23AP30-201ENST00000432419 501 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 RPS15AP9-201ENST00000439856 381 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 Z98949.2-201ENST00000440996 144 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC002486.2-201ENST00000447806 590 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 MTND4P17-201ENST00000470444 350 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC087385.2-201ENST00000477729 498 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC027026.1-201ENST00000532323 742 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AL163153.1-201ENST00000554223 283 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 AL845552.1-201ENST00000556820 323 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 RFPL4AP6-201ENST00000616792 846 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 TCP11X1-202ENST00000622971 1372 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PHOX2BQ99453 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
PHOX2BQ99453 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PHOX2BQ99453 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PHOX2BQ99453 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 SMG1P1-202ENST00000309865 4223 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 ASNSP3-201ENST00000451989 1306 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 RNU6-984P-201ENST00000363236 109 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 RPS3AP5-201ENST00000389400 821 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 DHFRP6-201ENST00000401776 268 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 Y_RNA.605-201ENST00000410577 105 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 Y_RNA.615-201ENST00000410769 117 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 RNU6-847P-201ENST00000411115 108 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AL133384.1-201ENST00000412744 351 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC008280.1-201ENST00000418851 412 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 ARL5AP1-201ENST00000418991 388 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC006548.1-201ENST00000427470 102 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC010881.1-201ENST00000433830 235 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 RN7SL152P-201ENST00000484176 298 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC095059.2-201ENST00000510601 933 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC114797.1-201ENST00000514003 728 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 RNU6-202P-201ENST00000515998 96 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC009902.1-201ENST00000519351 183 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 COX6CP5-201ENST00000527162 228 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 PCNAP4-201ENST00000532690 730 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 OR4N1P-201ENST00000554847 949 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 PPIAP6-201ENST00000557078 499 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 MIR3680-2-201ENST00000578247 87 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 MIR3680-1-201ENST00000581433 87 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 uc_338.37-201ENST00000620113 186 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms