Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 OR4G2P-201ENST00000328113 903 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 RNU6-353P-201ENST00000364266 108 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 RNA5SP478-201ENST00000364657 115 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 SNORA43.1-201ENST00000364863 140 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 SNORA70H-201ENST00000383910 135 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 SNORA70J-201ENST00000384182 135 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AL079342.2-201ENST00000403367 482 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 SPTLC1P2-201ENST00000407089 121 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 RN7SKP33-201ENST00000410942 340 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 CYP4F30P-202ENST00000420048 405 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 PCBP2P1-201ENST00000437262 977 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC016908.1-201ENST00000442571 1219 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 UBFD1P1-201ENST00000473259 814 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 OR4G11P-201ENST00000492842 939 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC112198.1-201ENST00000505369 1220 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC013701.1-201ENST00000522657 465 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC109635.3-201ENST00000529536 185 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 ZNF322P1-201ENST00000568013 1209 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC027229.1-201ENST00000583887 253 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 OR4G1P-201ENST00000588632 938 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC083899.3-201ENST00000603413 594 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AL136131.3-201ENST00000607600 188 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC016717.3-201ENST00000624730 554 ntBASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNGAP1Q96PV0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
SYNGAP1Q96PV0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNGAP1Q96PV0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNGAP1Q96PV0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
SYNGAP1Q96PV0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNGAP1Q96PV0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC010329.1-201ENST00000593903 8328 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 TPMTP3-201ENST00000411928 735 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 RPS15AP38-201ENST00000413110 372 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 PAICSP7-201ENST00000419829 962 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 GTF2IP23-201ENST00000423746 351 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AL035458.1-201ENST00000433096 585 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 RPS27AP2-201ENST00000457576 465 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC108161.1-201ENST00000461060 402 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 RPS20P4-201ENST00000461659 355 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 RPL31P58-201ENST00000469001 379 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 PFN1P6-201ENST00000476786 399 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC090071.1-201ENST00000507713 644 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 IGHV1-14-201ENST00000523391 241 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AL592494.3-201ENST00000609485 464 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC090970.3-201ENST00000612566 866 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 RNA5SP440-201ENST00000612665 119 ntBASIC6.96□□□□□ -1.3
SYNGAP1Q96PV0 AC037198.3-201ENST00000616754 526 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms