Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 Y_RNA.51-201ENST00000362725 102 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 RNU6-623P-201ENST00000363143 105 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 RNU1-87P-201ENST00000363727 170 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 SNORD116.1-201ENST00000365628 92 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 RNU5A-2P-201ENST00000384337 116 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 ERHP2-201ENST00000402323 299 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 RPS3AP2-201ENST00000407190 754 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL590084.1-201ENST00000407885 387 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL355433.1-201ENST00000422804 300 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL365203.2-201ENST00000423444 196 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 MTCO3P30-201ENST00000426425 670 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 DEFA9P-201ENST00000433042 285 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 USP24P1-201ENST00000433802 779 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 MTCYBP42-201ENST00000444653 1130 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL050341.1-201ENST00000447743 313 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 MTND1P27-201ENST00000451117 902 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC233982.1-201ENST00000451247 436 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 RPL38P3-201ENST00000484463 213 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC119751.1-201ENST00000513357 765 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC139365.2-201ENST00000517972 253 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC008429.4-201ENST00000521201 182 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 HMGB1P42-201ENST00000532126 553 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC090022.1-201ENST00000546569 311 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 NPM1P42-201ENST00000560329 862 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 DPRXP4-201ENST00000578053 568 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC119403.2-201ENST00000590960 598 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC119501.1-201ENST00000603646 475 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 HIRAP1-201ENST00000605318 787 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AL031601.1-201ENST00000605702 394 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC135507.1-201ENST00000607214 561 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC008115.3-201ENST00000614874 549 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 RN7SL544P-201ENST00000617232 284 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 RN7SL763P-201ENST00000620922 284 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC069234.4-201ENST00000621276 412 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC007490.1-201ENST00000624321 703 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC092159.4-201ENST00000624944 550 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 ELL2P3-201ENST00000457883 1602 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC068870.3-201ENST00000625077 2536 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 AC016583.1-201ENST00000624221 2431 ntBASIC5.54□□□□□ -1.52
RNF31Q96EP0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF31Q96EP0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF31Q96EP0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF31Q96EP0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF31Q96EP0 AL355488.2-201ENST00000609909 2850 ntBASIC5.53□□□□□ -1.52
RNF31Q96EP0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 AC239868.2-201ENST00000564237 4527 ntBASIC5.53□□□□□ -1.52
RNF31Q96EP0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF31Q96EP0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF31Q96EP0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 AC004158.1-201ENST00000564508 4319 ntBASIC5.53□□□□□ -1.52
RNF31Q96EP0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 FAM133CP-201ENST00000332869 704 ntBASIC5.53□□□□□ -1.52
RNF31Q96EP0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF31Q96EP0 OR13C3-201ENST00000374781 1108 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms