Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.51□□□□□ -1.21
HLA-CQ95604 POLR3GP2-201ENST00000588366 668 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC121334.2-201ENST00000605387 271 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AL080312.2-201ENST00000613001 630 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 RN7SL126P-201ENST00000616400 299 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC022106.2-201ENST00000620114 757 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC119744.1-201ENST00000454746 1715 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 MAPK10-279ENST00000641157 2449 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 WNK1-220ENST00000574564 1401 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
HLA-CQ95604 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC069222.1-201ENST00000608028 3360 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 MAPK10-281ENST00000641170 3070 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 RNY1P12-201ENST00000364251 105 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 RN7SKP78-201ENST00000364711 318 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 VTRNA1-2-201ENST00000365241 89 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 MTCYBP4-201ENST00000401524 249 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC007365.2-201ENST00000428806 458 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 TUBB4BP6-201ENST00000437576 479 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AL121578.2-201ENST00000448797 447 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 CACYBPP2-201ENST00000453625 678 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 RPS26P11-201ENST00000463445 348 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 RPS26P6-201ENST00000475156 348 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC005017.1-201ENST00000482002 490 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC233702.1-201ENST00000482905 502 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC008967.1-201ENST00000504843 163 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC113367.2-201ENST00000505749 160 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-CQ95604 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 SCARNA21.2-201ENST00000516600 166 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 OR5F2P-201ENST00000532761 941 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC090502.2-201ENST00000549267 280 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 HSPE1P3-201ENST00000559254 309 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC026464.5-201ENST00000562497 722 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 RN7SL199P-201ENST00000578752 281 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 RN7SL656P-201ENST00000579044 281 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 RN7SL270P-201ENST00000579643 281 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AC006967.3-201ENST00000594086 1093 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-CQ95604 AL121809.2-201ENST00000613169 341 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AL354950.2-201ENST00000617939 290 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AC027559.1-201ENST00000636288 271 ntBASIC7.5□□□□□ -1.21
HLA-CQ95604 AP001350.1-201ENST00000601906 1524 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms