Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRT78Q8N1N4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AP000756.2-201ENST00000624168 2567 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC092162.3-201ENST00000624511 1624 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 MIR130A-201ENST00000385274 89 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL079342.2-201ENST00000403367 482 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 BX323845.3-201ENST00000428215 527 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC242426.1-201ENST00000435270 960 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 MTATP6P26-201ENST00000445926 662 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC117394.1-201ENST00000477323 567 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 OR7E157P-201ENST00000494376 911 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC113347.3-201ENST00000509113 148 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 RNU6-416P-201ENST00000516265 103 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC079600.1-201ENST00000550326 297 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL442163.2-201ENST00000553912 710 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 MTND3P13-201ENST00000574391 343 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL592148.2-201ENST00000612210 372 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 AL121890.2-201ENST00000617644 465 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 CR392039.4-201ENST00000624968 501 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.5□□□□□ -1.53
KRT78Q8N1N4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRT78Q8N1N4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 U3.10-201ENST00000364459 214 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 OR1L1-202ENST00000373686 1083 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 NCSTNP1-201ENST00000406229 144 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 RNF10P1-201ENST00000418589 369 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 HMGB1P49-201ENST00000418882 569 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 MTCO2P21-201ENST00000419780 677 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 OR10T1P-201ENST00000424327 947 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AL009174.1-201ENST00000426577 416 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 NPM1P24-201ENST00000428039 894 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 PTENP1-201ENST00000447117 1215 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AP006222.1-205ENST00000450734 457 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms