Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 RPL23AP20-201ENST00000447965 421 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC239798.3-201ENST00000454459 408 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MTCO3P10-201ENST00000455912 772 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC025674.1-201ENST00000507074 324 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC146944.3-201ENST00000509969 371 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.691-201ENST00000516611 103 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC021733.2-201ENST00000518830 497 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 SAA3P-201ENST00000533267 365 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC244034.2-201ENST00000562504 509 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MIR5697-201ENST00000578045 78 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MIR4310-201ENST00000582950 57 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC009977.1-201ENST00000586015 570 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC009955.2-201ENST00000597288 542 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC004696.1-201ENST00000614345 607 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AL591926.1-201ENST00000620542 217 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 uc_338.22-201ENST00000622722 187 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC093591.3-201ENST00000634516 308 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 AC129502.1-201ENST00000623261 1654 ntBASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NPAS3Q8IXF0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC123769.2-201ENST00000624332 5984 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC073055.1-201ENST00000456901 1621 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC005294.1-201ENST00000355509 281 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RNU6-74P-201ENST00000384235 107 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RNU6-1297P-201ENST00000384415 104 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RNU6-510P-201ENST00000391239 108 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC025750.1-201ENST00000399891 379 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 NDUFB4P5-201ENST00000415445 361 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 VDAC1P2-201ENST00000423609 850 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AL121916.1-201ENST00000429405 308 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC234064.1-201ENST00000436312 247 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 IFNA20P-201ENST00000436840 528 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RPL7P11-201ENST00000437586 658 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 PGBD4P3-201ENST00000440731 581 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RPL32P28-201ENST00000443577 397 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 CTSLP6-201ENST00000458273 1002 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 GLRXP3-201ENST00000470810 321 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC135999.1-201ENST00000478962 479 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RN7SL170P-201ENST00000487098 295 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 RPL36AP51-201ENST00000487216 318 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC093816.1-201ENST00000515076 913 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC087276.1-201ENST00000529659 480 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AP003034.1-201ENST00000534621 422 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC005519.1-201ENST00000554490 601 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC011840.5-201ENST00000582125 771 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC026898.1-201ENST00000586404 571 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC020914.6-201ENST00000594327 272 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms