Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 TMEM30CP-203ENST00000637814 1035 ntBASIC4.55□□□□□ -1.68
RIF1Q5UIP0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AP001002.1-201ENST00000625148 1513 ntBASIC4.55□□□□□ -1.68
RIF1Q5UIP0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AC023818.1-201ENST00000498379 384 ntBASIC4.55□□□□□ -1.68
RIF1Q5UIP0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AC015712.7-201ENST00000615211 635 ntBASIC4.55□□□□□ -1.68
RIF1Q5UIP0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RIF1Q5UIP0 ZNF137P-201ENST00000456718 1920 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC021146.4-201ENST00000309229 279 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 RN7SL189P-201ENST00000468631 289 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC107982.3-201ENST00000584957 985 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AL121950.1-201ENST00000624993 2077 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 RN7SKP153-201ENST00000365026 316 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 MIR218-2-201ENST00000385006 110 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 ARL4AP5-201ENST00000404372 599 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 NFYAP1-201ENST00000431953 972 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 USP24P1-201ENST00000433802 779 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC022133.1-201ENST00000490961 571 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 RN7SL558P-201ENST00000497468 299 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC099669.2-201ENST00000616549 437 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AL022401.1-201ENST00000619498 108 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AP001885.1-201ENST00000621658 558 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 WBP11P1-201ENST00000562560 1931 ntBASIC4.54□□□□□ -1.68
RIF1Q5UIP0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIF1Q5UIP0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AL356276.2-201ENST00000435919 558 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AP001804.2-201ENST00000533932 910 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AP001160.4-201ENST00000596971 382 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 OR2BH1P-201ENST00000608850 864 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 TMSB10P2-201ENST00000416049 131 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 VN1R105P-201ENST00000486595 910 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AL356608.1-201ENST00000610034 820 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AL136164.3-201ENST00000624429 3978 ntBASIC4.53□□□□□ -1.68
RIF1Q5UIP0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.53□□□□□ -1.68
RIF1Q5UIP0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC120036.2-201ENST00000509729 1474 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 SDHCP2-201ENST00000398565 501 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms