Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL121890.3-201ENST00000618494 516 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC022079.2-201ENST00000619739 566 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC073342.3-201ENST00000624211 193 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC015726.3-201ENST00000624501 418 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL627171.1-201ENST00000618845 1308 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 RNF6P1-201ENST00000444889 1784 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 RN7SKP292-201ENST00000365522 317 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 RNU1-74P-201ENST00000384108 171 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 DNAJC19P6-201ENST00000401853 280 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 SLC20A1P1-201ENST00000413906 956 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 TCEA1P2-201ENST00000420496 906 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 MTND4P31-201ENST00000425607 1343 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AL662874.1-201ENST00000426065 230 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 CBX1P4-201ENST00000439415 457 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC092170.1-201ENST00000440211 356 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 OR52E3P-201ENST00000452083 936 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 RNU6-1218P-201ENST00000458990 108 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 RN7SL583P-201ENST00000475692 287 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AP000797.2-201ENST00000475768 606 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 RPS4XP6-201ENST00000477670 797 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC104982.1-201ENST00000478775 574 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC005912.1-201ENST00000495392 255 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 IGBP1P4-201ENST00000503202 879 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC026414.1-201ENST00000504046 698 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 RNU6-615P-201ENST00000516065 106 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 SNORA43.3-201ENST00000517240 103 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC095057.3-201ENST00000567102 1157 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC027243.2-201ENST00000602530 724 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC011447.7-201ENST00000624228 1590 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC010608.3-201ENST00000625048 527 ntBASIC5.61□□□□□ -1.51
CCDC38Q502W7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC38Q502W7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC38Q502W7 MAPK10-286ENST00000641208 8747 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 AC006042.3-201ENST00000454684 1469 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC38Q502W7 NEAT1-202ENST00000501122 22743 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC38Q502W7 RNU5B-1-201ENST00000363286 116 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 RNA5SP131-201ENST00000365452 119 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 MIR323B-201ENST00000385269 82 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 RPS3AP2-201ENST00000407190 754 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.6□□□□□ -1.51
CCDC38Q502W7 IPPKP1-201ENST00000422501 768 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms