Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXF1Q12946 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXF1Q12946 AC015912.2-201ENST00000571053 181 ntBASIC4.21□□□□□ -1.74
FOXF1Q12946 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXF1Q12946 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.21□□□□□ -1.74
FOXF1Q12946 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.21□□□□□ -1.74
FOXF1Q12946 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXF1Q12946 U3.53-201ENST00000628922 216 ntBASIC4.21□□□□□ -1.74
FOXF1Q12946 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXF1Q12946 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXF1Q12946 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
FOXF1Q12946 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXF1Q12946 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
FOXF1Q12946 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
FOXF1Q12946 CDY3P-201ENST00000454543 1618 ntBASIC4.21□□□□□ -1.74
FOXF1Q12946 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXF1Q12946 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 RN7SKP115-201ENST00000363177 317 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 MIR937-201ENST00000401271 86 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 Z98745.1-201ENST00000402553 494 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AC019050.1-201ENST00000418508 492 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXF1Q12946 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXF1Q12946 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 RN7SL354P-201ENST00000469282 294 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 AC104763.1-201ENST00000475274 360 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 MTND4LP2-201ENST00000502312 285 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXF1Q12946 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXF1Q12946 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXF1Q12946 AC116651.1-201ENST00000609724 556 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 AC234782.5-201ENST00000617723 324 ntBASIC4.2□□□□□ -1.74
FOXF1Q12946 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXF1Q12946 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXF1Q12946 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXF1Q12946 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC108467.2-201ENST00000617640 1597 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 ZNF137P-201ENST00000456718 1920 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 ICE2P1-201ENST00000512800 1849 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AL513548.1-201ENST00000562904 1724 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 RNVU1-6-201ENST00000364688 164 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FOXF1Q12946 RN7SKP199-201ENST00000410325 305 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 RNU2-50P-201ENST00000410494 143 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 FABP7P2-201ENST00000429946 379 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXF1Q12946 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXF1Q12946 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC073264.2-201ENST00000448886 166 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AL445433.1-201ENST00000457507 257 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AC112206.1-201ENST00000468416 477 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AC108751.2-201ENST00000469993 231 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 SUMO2P4-201ENST00000504193 276 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXF1Q12946 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXF1Q12946 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC079075.1-201ENST00000559543 878 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 RN7SL690P-201ENST00000582087 240 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 RNF138P2-201ENST00000603490 592 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC004232.3-201ENST00000622977 525 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 AL391684.1-202ENST00000641293 1636 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 Z95327.2-201ENST00000414579 1873 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FOXF1Q12946 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 AL355852.1-201ENST00000454081 1771 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 AC135352.1-201ENST00000506173 1418 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXF1Q12946 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms