Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC093875.1-201ENST00000623688 504 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC132068.1-201ENST00000623805 459 ntBASIC4.92□□□□□ -1.62
LTBQ06643 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 AC017002.4-201ENST00000604721 1525 ntBASIC4.92□□□□□ -1.62
LTBQ06643 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.92□□□□□ -1.62
LTBQ06643 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 AL353796.1-201ENST00000561542 3241 ntBASIC4.91□□□□□ -1.62
LTBQ06643 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LTBQ06643 RN7SKP186-201ENST00000365371 303 ntBASIC4.91□□□□□ -1.62
LTBQ06643 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 ZNF885P-201ENST00000420174 1098 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 MED6P1-201ENST00000439659 713 ntBASIC4.91□□□□□ -1.62
LTBQ06643 MTCYBP21-201ENST00000443300 1113 ntBASIC4.91□□□□□ -1.62
LTBQ06643 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LTBQ06643 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 AC008379.1-201ENST00000463655 464 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 CYCSP20-201ENST00000473154 315 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC007686.1-201ENST00000488511 463 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AP000563.1-201ENST00000490865 758 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 AC109464.1-201ENST00000511091 819 ntBASIC4.91□□□□□ -1.62
LTBQ06643 ASNSP4-201ENST00000511103 447 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC021193.1-201ENST00000511607 420 ntBASIC4.91□□□□□ -1.62
LTBQ06643 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 RNU6-311P-201ENST00000516224 102 ntBASIC4.91□□□□□ -1.62
LTBQ06643 RNA5SP230-201ENST00000517039 122 ntBASIC4.91□□□□□ -1.62
LTBQ06643 NRBF2P4-201ENST00000520874 850 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 AL359219.2-201ENST00000555184 348 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 RBM22P12-201ENST00000567098 1255 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC145350.1-201ENST00000567426 208 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 MIR4660-201ENST00000583549 74 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.91□□□□□ -1.62
LTBQ06643 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 AL583832.1-201ENST00000603227 784 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC084373.1-201ENST00000603311 235 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC087763.1-201ENST00000603391 286 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC015849.2-201ENST00000605738 409 ntBASIC4.91□□□□□ -1.62
LTBQ06643 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 AL139407.1-201ENST00000613826 1175 ntBASIC4.91□□□□□ -1.62
LTBQ06643 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.91□□□□□ -1.62
LTBQ06643 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 uc_338.7-201ENST00000621834 124 ntBASIC4.91□□□□□ -1.62
LTBQ06643 MIR8080-201ENST00000622224 89 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 AP000346.3-201ENST00000622821 210 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC004943.3-201ENST00000624116 600 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.91□□□□□ -1.62
LTBQ06643 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.91□□□□□ -1.62
LTBQ06643 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LTBQ06643 AC005261.6-201ENST00000623072 1387 ntBASIC4.91□□□□□ -1.62
LTBQ06643 AC112198.2-201ENST00000426589 6996 ntBASIC4.9□□□□□ -1.62
LTBQ06643 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
LTBQ06643 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LTBQ06643 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LTBQ06643 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LTBQ06643 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
LTBQ06643 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LTBQ06643 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LTBQ06643 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 MIR765-201ENST00000390226 114 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms