Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SL802P-201ENST00000577858 299 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AP005119.2-201ENST00000579735 1105 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM4P67936 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 AC073137.1-201ENST00000605636 634 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AL512329.2-201ENST00000607350 548 ntBASIC5.21□□□□□ -1.58
TPM4P67936 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.21□□□□□ -1.58
TPM4P67936 AL669942.2-201ENST00000620352 697 ntBASIC5.21□□□□□ -1.58
TPM4P67936 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.21□□□□□ -1.58
TPM4P67936 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM4P67936 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM4P67936 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM4P67936 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM4P67936 AL592182.3-201ENST00000642132 3304 ntBASIC5.21□□□□□ -1.58
TPM4P67936 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM4P67936 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM4P67936 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TPM4P67936 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM4P67936 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 RNU6-729P-201ENST00000384399 107 ntBASIC5.2□□□□□ -1.58
TPM4P67936 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TPM4P67936 NPM1P4-201ENST00000414095 812 ntBASIC5.2□□□□□ -1.58
TPM4P67936 ATG4AP1-201ENST00000416893 538 ntBASIC5.2□□□□□ -1.58
TPM4P67936 GLUD1P9-201ENST00000420997 1173 ntBASIC5.2□□□□□ -1.58
TPM4P67936 RPL24P2-201ENST00000421023 475 ntBASIC5.2□□□□□ -1.58
TPM4P67936 CENPIP1-201ENST00000425713 902 ntBASIC5.2□□□□□ -1.58
TPM4P67936 RPL21P91-201ENST00000429231 479 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 AC245047.2-201ENST00000441060 530 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC234781.3-201ENST00000452540 973 ntBASIC5.2□□□□□ -1.58
TPM4P67936 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.2□□□□□ -1.58
TPM4P67936 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM4P67936 AC006967.1-201ENST00000467608 589 ntBASIC5.2□□□□□ -1.58
TPM4P67936 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM4P67936 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM4P67936 HMGB3P13-201ENST00000511263 607 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC090151.1-201ENST00000520784 730 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM4P67936 AC004825.1-201ENST00000555068 586 ntBASIC5.2□□□□□ -1.58
TPM4P67936 MTND6P33-201ENST00000571794 183 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AL121834.1-201ENST00000572284 509 ntBASIC5.2□□□□□ -1.58
TPM4P67936 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 MIR4675-201ENST00000577898 77 ntBASIC5.2□□□□□ -1.58
TPM4P67936 MIR5699-201ENST00000578903 90 ntBASIC5.2□□□□□ -1.58
TPM4P67936 MIR4691-201ENST00000583764 85 ntBASIC5.2□□□□□ -1.58
TPM4P67936 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 MEMO1P5-201ENST00000604810 406 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC007497.1-201ENST00000610421 561 ntBASIC5.2□□□□□ -1.58
TPM4P67936 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TPM4P67936 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.2□□□□□ -1.58
TPM4P67936 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TPM4P67936 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TPM4P67936 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TPM4P67936 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM4P67936 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM4P67936 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM4P67936 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.19□□□□□ -1.58
TPM4P67936 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM4P67936 RPS29P14-201ENST00000431518 171 ntBASIC5.19□□□□□ -1.58
TPM4P67936 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.19□□□□□ -1.58
TPM4P67936 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM4P67936 FGF7P3-201ENST00000454645 303 ntBASIC5.19□□□□□ -1.58
TPM4P67936 AK4P6-201ENST00000505168 528 ntBASIC5.19□□□□□ -1.58
TPM4P67936 AC098799.3-201ENST00000506095 438 ntBASIC5.19□□□□□ -1.58
TPM4P67936 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.19□□□□□ -1.58
TPM4P67936 AC020978.7-201ENST00000575953 1187 ntBASIC5.19□□□□□ -1.58
TPM4P67936 AC022726.1-201ENST00000587475 207 ntBASIC5.19□□□□□ -1.58
TPM4P67936 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TPM4P67936 MIR6778-201ENST00000617912 73 ntBASIC5.19□□□□□ -1.58
TPM4P67936 MIR7154-201ENST00000620673 73 ntBASIC5.19□□□□□ -1.58
TPM4P67936 MIR1910-201ENST00000636955 80 ntBASIC5.19□□□□□ -1.58
TPM4P67936 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TPM4P67936 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TPM4P67936 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TPM4P67936 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM4P67936 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TPM4P67936 RNU1-82P-201ENST00000390851 165 ntBASIC5.18□□□□□ -1.58
TPM4P67936 SEPT7P2-202ENST00000398921 823 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms