Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AP003717.3-201ENST00000544832 1180 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.22□□□□□ -1.41
RHBDL3P58872 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.22□□□□□ -1.41
RHBDL3P58872 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AC087783.2-201ENST00000605070 562 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AC026741.1-201ENST00000605892 482 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AP005432.2-201ENST00000608162 586 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AC021851.1-201ENST00000608537 1082 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AC253576.2-201ENST00000618815 580 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AC087385.3-201ENST00000620477 187 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RHBDL3P58872 TMEM30CP-203ENST00000637814 1035 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RHBDL3P58872 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RHBDL3P58872 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RHBDL3P58872 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.22□□□□□ -1.41
RHBDL3P58872 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
RHBDL3P58872 AL603750.1-201ENST00000624216 1717 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 SMG1P6-201ENST00000532337 2930 ntBASIC6.22□□□□□ -1.41
RHBDL3P58872 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.21□□□□□ -1.41
RHBDL3P58872 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.41
RHBDL3P58872 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RHBDL3P58872 AL137141.1-201ENST00000624622 4836 ntBASIC6.21□□□□□ -1.41
RHBDL3P58872 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RHBDL3P58872 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC092681.1-201ENST00000297369 291 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 RNU4-44P-201ENST00000363050 141 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 MIR92A2-201ENST00000385299 75 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 RNU6-603P-201ENST00000411403 107 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 DDX39BP1-205ENST00000422507 192 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 PPM1AP1-201ENST00000502740 1135 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 OR5H3P-201ENST00000502817 919 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AP000916.1-201ENST00000533869 835 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC027104.1-201ENST00000563702 681 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.21□□□□□ -1.42
RHBDL3P58872 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC093388.1-201ENST00000609166 430 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AC243654.2-201ENST00000612843 443 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC008759.3-201ENST00000613300 508 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AC091953.3-201ENST00000623220 236 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AC112694.2-201ENST00000623697 768 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RHBDL3P58872 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC006042.3-201ENST00000454684 1469 ntBASIC6.21□□□□□ -1.42
RHBDL3P58872 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RHBDL3P58872 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.21□□□□□ -1.42
RHBDL3P58872 AL591135.1-201ENST00000401578 5914 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.2□□□□□ -1.42
RHBDL3P58872 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RHBDL3P58872 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.2□□□□□ -1.42
RHBDL3P58872 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RHBDL3P58872 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RHBDL3P58872 ATF1P1-201ENST00000406040 927 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 HMGB3P31-201ENST00000413333 595 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 MTCO2P1-201ENST00000424648 477 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AC009965.2-201ENST00000425328 970 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.2□□□□□ -1.42
RHBDL3P58872 RPS29P10-201ENST00000439197 166 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.2□□□□□ -1.42
RHBDL3P58872 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.2□□□□□ -1.42
RHBDL3P58872 Z80107.2-201ENST00000445127 392 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 RPS3AP41-201ENST00000462701 778 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 PPIAP21-201ENST00000464473 501 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 HMGN2P25-201ENST00000486956 268 ntBASIC6.2□□□□□ -1.42
RHBDL3P58872 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms