Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 CASC19-260ENST00000641828 2001 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLRN1P58418 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLRN1P58418 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.34□□□□□ -1.56
CLRN1P58418 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.34□□□□□ -1.56
CLRN1P58418 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.34□□□□□ -1.56
CLRN1P58418 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
CLRN1P58418 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
CLRN1P58418 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 RBMY1HP-201ENST00000382759 1389 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CLRN1P58418 BCORP1-203ENST00000513194 5093 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC109315.1-201ENST00000584143 1347 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC011477.1-204ENST00000623416 1325 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 HMGB1P5-201ENST00000255320 642 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 RNA5SP110-201ENST00000362638 115 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.33□□□□□ -1.56
CLRN1P58418 Y_RNA.408-201ENST00000383987 102 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLRN1P58418 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLRN1P58418 GCNT1P4-201ENST00000404096 329 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 RN7SKP222-201ENST00000410651 315 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC019050.1-201ENST00000418508 492 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC114814.2-201ENST00000419195 485 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AL009174.1-201ENST00000426577 416 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 SEPT7P5-201ENST00000434048 306 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 RPL5P7-201ENST00000444235 813 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 TIMM8BP2-201ENST00000445940 251 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC098847.1-201ENST00000473094 348 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 RN7SL836P-201ENST00000476140 296 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 ARL4AP1-201ENST00000503220 705 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.33□□□□□ -1.56
CLRN1P58418 HMGB1P23-201ENST00000518743 568 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC060788.1-201ENST00000521318 469 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC002519.2-203ENST00000567043 837 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 MIR4502-201ENST00000580432 81 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC095055.1-201ENST00000603472 1113 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC006270.3-201ENST00000605967 1036 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 AC048341.3-201ENST00000619323 491 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.33□□□□□ -1.56
CLRN1P58418 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLRN1P58418 AP000547.3-204ENST00000588548 2523 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 AC093311.1-201ENST00000506586 2021 ntBASIC5.33□□□□□ -1.56
CLRN1P58418 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLRN1P58418 GNL2P1-201ENST00000451274 2190 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 MTND5P24-201ENST00000438892 1767 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.32□□□□□ -1.56
CLRN1P58418 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLRN1P58418 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLRN1P58418 OR8V1P-201ENST00000395193 873 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLRN1P58418 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLRN1P58418 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.32□□□□□ -1.56
CLRN1P58418 AC245096.1-201ENST00000413104 546 ntBASIC5.32□□□□□ -1.56
CLRN1P58418 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.32□□□□□ -1.56
CLRN1P58418 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms