Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GFRA1P56159 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA1P56159 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.79□□□□□ -1.48
GFRA1P56159 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
GFRA1P56159 CASC19-246ENST00000641625 1606 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA1P56159 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA1P56159 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GFRA1P56159 RNU6-462P-201ENST00000362659 105 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 SNORD16-201ENST00000362803 99 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 RNU5F-6P-201ENST00000362979 116 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AL050335.1-201ENST00000396909 869 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 MTCYBP36-201ENST00000404146 440 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA1P56159 AC083875.1-201ENST00000419509 405 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AL953862.1-201ENST00000423016 168 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA1P56159 AC011742.2-201ENST00000443818 352 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.79□□□□□ -1.48
GFRA1P56159 AL672138.1-201ENST00000450604 1015 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 RN7SL552P-201ENST00000462094 276 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AC026254.2-201ENST00000475295 371 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AC092824.1-201ENST00000483524 576 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AC091965.3-201ENST00000506236 208 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA1P56159 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 DEFB131D-201ENST00000526803 184 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 AC107958.1-201ENST00000556576 290 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 OR1E3-201ENST00000575608 948 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 MIR4528-201ENST00000577763 90 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.79□□□□□ -1.48
GFRA1P56159 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.79□□□□□ -1.48
GFRA1P56159 AC015871.2-201ENST00000603605 948 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AC008115.3-201ENST00000614874 549 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 MIR6811-201ENST00000620409 58 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AL591926.1-201ENST00000620542 217 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 AP000648.2-201ENST00000624182 404 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 AL008636.1-201ENST00000625038 1018 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 AL596275.2-208ENST00000641192 594 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 OR11H2-202ENST00000641517 1085 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 AC125238.2-201ENST00000430003 1440 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.79□□□□□ -1.48
GFRA1P56159 AL031985.3-201ENST00000565390 2449 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA1P56159 MFSD8-219ENST00000641228 2559 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GFRA1P56159 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 MTND4P16-201ENST00000466108 1367 ntBASIC5.79□□□□□ -1.48
GFRA1P56159 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.79□□□□□ -1.48
GFRA1P56159 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA1P56159 CASC19-204ENST00000641001 2055 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GFRA1P56159 Y_RNA.248-201ENST00000364501 109 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 RNU6-1283P-201ENST00000365314 105 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 RN7SKP187-201ENST00000365536 330 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
GFRA1P56159 MTND1P21-201ENST00000412991 285 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 HMGB1P11-201ENST00000413899 637 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.78□□□□□ -1.48
GFRA1P56159 RBMY2KP-201ENST00000418221 992 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AC233981.1-201ENST00000423224 461 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 OSTCP4-201ENST00000424397 449 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AL157884.1-201ENST00000424561 454 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA1P56159 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.78□□□□□ -1.48
GFRA1P56159 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 RPS26P40-201ENST00000435209 294 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 FABP5P2-201ENST00000439042 408 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 BMS1P10-201ENST00000443754 1120 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 EEF1B2P3-201ENST00000447718 678 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 PDSS1P2-201ENST00000449397 678 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 RPL7P31-201ENST00000450192 724 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.78□□□□□ -1.48
GFRA1P56159 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GFRA1P56159 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.78□□□□□ -1.48
GFRA1P56159 RN7SL643P-201ENST00000471845 291 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 RPL7P24-201ENST00000493052 752 ntBASIC5.78□□□□□ -1.48
GFRA1P56159 RN7SL362P-201ENST00000494228 267 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms