Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.5□□□□□ -1.37
PMS1P54277 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AC074051.3-201ENST00000570238 358 ntBASIC6.5□□□□□ -1.37
PMS1P54277 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AC011260.1-201ENST00000578420 472 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.5□□□□□ -1.37
PMS1P54277 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AC006115.2-201ENST00000596823 202 ntBASIC6.5□□□□□ -1.37
PMS1P54277 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.5□□□□□ -1.37
PMS1P54277 AC079089.3-201ENST00000603094 673 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AC128687.1-201ENST00000605304 619 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AC093388.1-201ENST00000609166 430 ntBASIC6.5□□□□□ -1.37
PMS1P54277 MIR6809-201ENST00000612189 116 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.5□□□□□ -1.37
PMS1P54277 AL031667.3-201ENST00000620124 655 ntBASIC6.5□□□□□ -1.37
PMS1P54277 AL160394.1-201ENST00000624765 724 ntBASIC6.5□□□□□ -1.37
PMS1P54277 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 AC127502.3-201ENST00000636170 1206 ntBASIC6.5□□□□□ -1.37
PMS1P54277 U6.107-201ENST00000637108 79 ntBASIC6.5□□□□□ -1.37
PMS1P54277 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
PMS1P54277 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PMS1P54277 MFSD8-219ENST00000641228 2559 ntBASIC6.5□□□□□ -1.37
PMS1P54277 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 RBPJP7-201ENST00000442803 1447 ntBASIC6.5□□□□□ -1.37
PMS1P54277 RBPJP5-201ENST00000449433 1447 ntBASIC6.5□□□□□ -1.37
PMS1P54277 GTF2H2B-203ENST00000508065 1432 ntBASIC6.5□□□□□ -1.37
PMS1P54277 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PMS1P54277 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.49□□□□□ -1.37
PMS1P54277 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.49□□□□□ -1.37
PMS1P54277 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 U3.4-201ENST00000363352 213 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RN7SKP128-201ENST00000364270 303 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RN7SKP78-201ENST00000364711 318 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RNU4-7P-201ENST00000364758 141 ntBASIC6.49□□□□□ -1.37
PMS1P54277 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 OR2W4P-201ENST00000406496 926 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RN7SKP86-201ENST00000410454 332 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RNU2-16P-201ENST00000410712 136 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RN7SKP142-201ENST00000411236 328 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RNU6-575P-201ENST00000411326 105 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AL022331.1-201ENST00000429025 477 ntBASIC6.49□□□□□ -1.37
PMS1P54277 MTND1P4-201ENST00000435196 415 ntBASIC6.49□□□□□ -1.37
PMS1P54277 PNKDP1-201ENST00000435914 430 ntBASIC6.49□□□□□ -1.37
PMS1P54277 TPTE2P6-202ENST00000445572 1007 ntBASIC6.49□□□□□ -1.37
PMS1P54277 MTND4P18-201ENST00000447010 465 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 OR52E3P-201ENST00000452083 936 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 AC104687.1-201ENST00000485829 412 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AC111193.1-201ENST00000504097 155 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC092349.1-201ENST00000504903 310 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AC004825.1-201ENST00000555068 586 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 MIR4666A-201ENST00000580160 79 ntBASIC6.49□□□□□ -1.37
PMS1P54277 RN7SL230P-201ENST00000580835 303 ntBASIC6.49□□□□□ -1.37
PMS1P54277 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.49□□□□□ -1.37
PMS1P54277 AC125494.2-201ENST00000602431 657 ntBASIC6.49□□□□□ -1.37
PMS1P54277 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.49□□□□□ -1.37
PMS1P54277 AL136363.2-201ENST00000604173 851 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC018714.1-201ENST00000605028 208 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC092681.3-201ENST00000609463 678 ntBASIC6.49□□□□□ -1.37
PMS1P54277 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.49□□□□□ -1.37
PMS1P54277 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 FAM27E2-201ENST00000619668 403 ntBASIC6.49□□□□□ -1.37
PMS1P54277 AC006840.1-201ENST00000623069 542 ntBASIC6.49□□□□□ -1.37
PMS1P54277 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.49□□□□□ -1.37
PMS1P54277 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PMS1P54277 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PMS1P54277 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.49□□□□□ -1.37
PMS1P54277 AC015799.1-201ENST00000622996 3122 ntBASIC6.49□□□□□ -1.37
PMS1P54277 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PMS1P54277 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms