Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MSH6P52701 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
MSH6P52701 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 AP002512.4-202ENST00000641599 4530 ntBASIC6.55□□□□□ -1.36
MSH6P52701 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 RNA5SP366-201ENST00000365454 123 ntBASIC6.55□□□□□ -1.36
MSH6P52701 RNU6-628P-201ENST00000410675 107 ntBASIC6.55□□□□□ -1.36
MSH6P52701 AC079809.1-201ENST00000415468 276 ntBASIC6.55□□□□□ -1.36
MSH6P52701 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.55□□□□□ -1.36
MSH6P52701 FTH1P16-201ENST00000435241 552 ntBASIC6.55□□□□□ -1.36
MSH6P52701 H2AFZP5-201ENST00000446960 382 ntBASIC6.55□□□□□ -1.36
MSH6P52701 RN7SL98P-201ENST00000462271 300 ntBASIC6.55□□□□□ -1.36
MSH6P52701 RN7SL558P-201ENST00000497468 299 ntBASIC6.55□□□□□ -1.36
MSH6P52701 RNU1-45P-201ENST00000517191 141 ntBASIC6.55□□□□□ -1.36
MSH6P52701 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.55□□□□□ -1.36
MSH6P52701 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.55□□□□□ -1.36
MSH6P52701 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.55□□□□□ -1.36
MSH6P52701 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.55□□□□□ -1.36
MSH6P52701 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.55□□□□□ -1.36
MSH6P52701 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 AC024220.1-201ENST00000603675 484 ntBASIC6.55□□□□□ -1.36
MSH6P52701 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.55□□□□□ -1.36
MSH6P52701 MIR3653-201ENST00000625572 110 ntBASIC6.55□□□□□ -1.36
MSH6P52701 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH6P52701 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.55□□□□□ -1.36
MSH6P52701 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
MSH6P52701 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 OR51B3P-201ENST00000412287 913 ntBASIC6.54□□□□□ -1.36
MSH6P52701 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 PRPF38AP1-201ENST00000451976 933 ntBASIC6.54□□□□□ -1.36
MSH6P52701 RN7SL132P-201ENST00000478131 296 ntBASIC6.54□□□□□ -1.36
MSH6P52701 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.54□□□□□ -1.36
MSH6P52701 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.54□□□□□ -1.36
MSH6P52701 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH6P52701 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 SNORA74C-1-201ENST00000580726 201 ntBASIC6.54□□□□□ -1.36
MSH6P52701 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.54□□□□□ -1.36
MSH6P52701 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
MSH6P52701 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH6P52701 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.53□□□□□ -1.36
MSH6P52701 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
MSH6P52701 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.53□□□□□ -1.36
MSH6P52701 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.53□□□□□ -1.36
MSH6P52701 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MSH6P52701 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.53□□□□□ -1.36
MSH6P52701 MIR659-201ENST00000384963 97 ntBASIC6.53□□□□□ -1.36
MSH6P52701 NPM1P37-201ENST00000403105 874 ntBASIC6.53□□□□□ -1.36
MSH6P52701 RAB9AP4-201ENST00000415230 609 ntBASIC6.53□□□□□ -1.36
MSH6P52701 RPL23AP83-201ENST00000434984 473 ntBASIC6.53□□□□□ -1.36
MSH6P52701 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.53□□□□□ -1.36
MSH6P52701 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.53□□□□□ -1.36
MSH6P52701 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.53□□□□□ -1.36
MSH6P52701 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.53□□□□□ -1.36
MSH6P52701 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.53□□□□□ -1.36
MSH6P52701 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 AC005261.4-201ENST00000600047 1385 ntBASIC6.53□□□□□ -1.36
MSH6P52701 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH6P52701 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH6P52701 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.52□□□□□ -1.36
MSH6P52701 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms