Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC139792.2-201ENST00000624218 587 ntBASIC4.9□□□□□ -1.63
SOX2P48431 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SOX2P48431 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.9□□□□□ -1.63
SOX2P48431 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SOX2P48431 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 YES1P1-201ENST00000418510 1628 ntBASIC4.9□□□□□ -1.63
SOX2P48431 PDZK1P1-202ENST00000425209 1350 ntBASIC4.9□□□□□ -1.63
SOX2P48431 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 AC100871.1-201ENST00000507871 1456 ntBASIC4.89□□□□□ -1.63
SOX2P48431 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 AC000367.1-201ENST00000452711 1766 ntBASIC4.89□□□□□ -1.63
SOX2P48431 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.89□□□□□ -1.63
SOX2P48431 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SOX2P48431 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 SNORD113-6-201ENST00000363345 75 ntBASIC4.89□□□□□ -1.63
SOX2P48431 RNU2-22P-201ENST00000411266 212 ntBASIC4.89□□□□□ -1.63
SOX2P48431 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 RPSAP35-201ENST00000413753 818 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 AC027644.1-201ENST00000419595 298 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 AC113412.1-201ENST00000425840 504 ntBASIC4.89□□□□□ -1.63
SOX2P48431 RPL7P56-201ENST00000429441 717 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL365396.1-201ENST00000430854 671 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 ARAFP2-201ENST00000440565 559 ntBASIC4.89□□□□□ -1.63
SOX2P48431 ATP5LP2-201ENST00000440646 311 ntBASIC4.89□□□□□ -1.63
SOX2P48431 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 RPL5P7-201ENST00000444235 813 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 AC097463.1-201ENST00000447288 481 ntBASIC4.89□□□□□ -1.63
SOX2P48431 IGBP1P3-201ENST00000447449 1000 ntBASIC4.89□□□□□ -1.63
SOX2P48431 RPL31P44-201ENST00000447680 377 ntBASIC4.89□□□□□ -1.63
SOX2P48431 RSL24D1P3-201ENST00000449255 495 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC104978.1-201ENST00000449387 391 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 RANP1-206ENST00000455094 651 ntBASIC4.89□□□□□ -1.63
SOX2P48431 NECAP1P2-201ENST00000455668 727 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 RPL9P15-201ENST00000491096 532 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 IGLV3-24-201ENST00000517477 197 ntBASIC4.89□□□□□ -1.63
SOX2P48431 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.89□□□□□ -1.63
SOX2P48431 AP003396.4-201ENST00000527574 265 ntBASIC4.89□□□□□ -1.63
SOX2P48431 TRIM51DP-201ENST00000529746 596 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC124293.1-201ENST00000530034 493 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 AL356057.1-201ENST00000533798 831 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.89□□□□□ -1.63
SOX2P48431 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 MIR5708-201ENST00000579723 85 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.89□□□□□ -1.63
SOX2P48431 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.89□□□□□ -1.63
SOX2P48431 AC010620.1-201ENST00000601088 1102 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL392112.1-201ENST00000605115 829 ntBASIC4.89□□□□□ -1.63
SOX2P48431 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 AP003392.5-201ENST00000607857 415 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC108673.3-201ENST00000609183 335 ntBASIC4.89□□□□□ -1.63
SOX2P48431 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.89□□□□□ -1.63
SOX2P48431 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 AC009318.3-201ENST00000616916 503 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC245014.3-201ENST00000618589 347 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL138693.1-201ENST00000622219 129 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AC007490.1-201ENST00000624321 703 ntBASIC4.89□□□□□ -1.63
SOX2P48431 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX2P48431 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 AC138393.1-206ENST00000540997 1886 ntBASIC4.89□□□□□ -1.63
SOX2P48431 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 AL137100.1-201ENST00000556703 1620 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms