Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNA5SP388-201ENST00000362584 119 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 RNA5SP191-201ENST00000362585 102 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC004074.1-201ENST00000421810 1063 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 CHIAP3-201ENST00000423668 1133 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC008427.1-201ENST00000503102 655 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AK3P4-201ENST00000504283 583 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC096754.1-201ENST00000508904 818 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.98□□□□□ -1.45
TM4SF4P48230 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC018442.3-201ENST00000523025 183 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC011611.5-201ENST00000552477 578 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 NMNAT1P1-201ENST00000554095 876 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.98□□□□□ -1.45
TM4SF4P48230 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.98□□□□□ -1.45
TM4SF4P48230 MIR548Y-201ENST00000582739 110 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC009237.13-201ENST00000603193 276 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC105254.2-201ENST00000603636 436 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC011453.2-201ENST00000603737 729 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC090525.3-201ENST00000605601 189 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC092653.1-201ENST00000608509 531 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AL669942.2-201ENST00000620352 697 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC126544.2-201ENST00000625174 749 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TM4SF4P48230 MIR6830-201ENST00000636015 70 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 HSPD1P14-201ENST00000432666 1618 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AL033543.1-201ENST00000623440 13454 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.98□□□□□ -1.45
TM4SF4P48230 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
TM4SF4P48230 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.98□□□□□ -1.45
TM4SF4P48230 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC010329.1-201ENST00000593903 8328 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC020656.2-201ENST00000613291 5309 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 METTL21EP-201ENST00000298105 713 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 FAM3C2-201ENST00000312214 681 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 SNORA66-201ENST00000384792 133 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 RPL22P22-201ENST00000395439 379 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 MIR298-201ENST00000401212 88 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.97□□□□□ -1.45
TM4SF4P48230 MTCO1P52-201ENST00000433928 531 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AL137845.2-201ENST00000444292 988 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AC022431.1-201ENST00000450941 438 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 PPIAP21-201ENST00000464473 501 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TM4SF4P48230 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.97□□□□□ -1.45
TM4SF4P48230 MRPS33P2-201ENST00000507850 322 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AC093824.1-201ENST00000508796 343 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AP003066.2-201ENST00000529375 555 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC025260.1-201ENST00000548858 430 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 CYB5AP5-201ENST00000549779 389 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.97□□□□□ -1.45
TM4SF4P48230 TVP23CP2-201ENST00000571473 623 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 MIR4277-201ENST00000578298 84 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 RN7SL690P-201ENST00000582087 240 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC012254.4-201ENST00000588843 273 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AL683813.2-201ENST00000605245 502 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AC011374.2-201ENST00000607135 526 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AP003400.3-201ENST00000624904 346 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms