Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HADHAP40939 MIR105-1-201ENST00000385222 81 ntBASIC5.31□□□□□ -1.56
HADHAP40939 RNU1-77P-201ENST00000390868 162 ntBASIC5.31□□□□□ -1.56
HADHAP40939 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 RNU2-50P-201ENST00000410494 143 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AL390774.1-201ENST00000411924 246 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AC007738.1-201ENST00000413892 348 ntBASIC5.31□□□□□ -1.56
HADHAP40939 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 TRGV6-201ENST00000417928 299 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AC099336.2-201ENST00000422457 254 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 CFL1P1-202ENST00000432948 411 ntBASIC5.31□□□□□ -1.56
HADHAP40939 MTCO1P52-201ENST00000433928 531 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AL161722.2-201ENST00000434731 981 ntBASIC5.31□□□□□ -1.56
HADHAP40939 YWHAZP2-201ENST00000440317 728 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 BX842559.2-201ENST00000451418 605 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AC099560.2-201ENST00000457554 255 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AC110749.1-201ENST00000462007 357 ntBASIC5.31□□□□□ -1.56
HADHAP40939 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 RPL5P22-201ENST00000480199 884 ntBASIC5.31□□□□□ -1.56
HADHAP40939 RPL7P41-201ENST00000485823 957 ntBASIC5.31□□□□□ -1.56
HADHAP40939 RPEP1-201ENST00000504507 658 ntBASIC5.31□□□□□ -1.56
HADHAP40939 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 AC013701.1-201ENST00000522657 465 ntBASIC5.31□□□□□ -1.56
HADHAP40939 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HADHAP40939 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 MIR4443-201ENST00000585052 53 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.31□□□□□ -1.56
HADHAP40939 AC005034.4-201ENST00000603612 899 ntBASIC5.31□□□□□ -1.56
HADHAP40939 IMMP1LP3-201ENST00000604197 224 ntBASIC5.31□□□□□ -1.56
HADHAP40939 AL162431.4-201ENST00000604674 411 ntBASIC5.31□□□□□ -1.56
HADHAP40939 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 AP003497.2-201ENST00000624220 967 ntBASIC5.31□□□□□ -1.56
HADHAP40939 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.31□□□□□ -1.56
HADHAP40939 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 ADAM5-202ENST00000399789 1942 ntBASIC5.31□□□□□ -1.56
HADHAP40939 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 RNU1-149P-201ENST00000390870 161 ntBASIC5.3□□□□□ -1.56
HADHAP40939 RNU6-244P-201ENST00000391028 104 ntBASIC5.3□□□□□ -1.56
HADHAP40939 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 SNORA11B-201ENST00000408175 129 ntBASIC5.3□□□□□ -1.56
HADHAP40939 RN7SKP59-201ENST00000410520 314 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC093655.2-201ENST00000425735 631 ntBASIC5.3□□□□□ -1.56
HADHAP40939 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 AL606490.1-201ENST00000452266 765 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AL354710.1-201ENST00000453641 246 ntBASIC5.3□□□□□ -1.56
HADHAP40939 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.3□□□□□ -1.56
HADHAP40939 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.3□□□□□ -1.56
HADHAP40939 CIR1P1-201ENST00000524055 1133 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC113192.3-201ENST00000529152 742 ntBASIC5.3□□□□□ -1.56
HADHAP40939 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 AC107918.3-201ENST00000533272 382 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.3□□□□□ -1.56
HADHAP40939 AC126177.5-201ENST00000549599 178 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC051619.2-201ENST00000559063 397 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC090079.2-201ENST00000575289 768 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.3□□□□□ -1.56
HADHAP40939 AP005262.1-201ENST00000582646 997 ntBASIC5.3□□□□□ -1.56
HADHAP40939 AL158211.2-201ENST00000607282 395 ntBASIC5.3□□□□□ -1.56
HADHAP40939 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
HADHAP40939 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.3□□□□□ -1.56
HADHAP40939 MTCO1P4-201ENST00000520516 1409 ntBASIC5.3□□□□□ -1.56
HADHAP40939 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HADHAP40939 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HADHAP40939 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HADHAP40939 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HADHAP40939 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
HADHAP40939 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HADHAP40939 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HADHAP40939 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms