Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC13P31276 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC13P31276 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC13P31276 Z99127.2-201ENST00000441426 334 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC011753.3-201ENST00000443436 406 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC13P31276 RPS6P2-201ENST00000454208 705 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC13P31276 EIF3KP3-201ENST00000514461 639 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC13P31276 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC13P31276 SS18L2P2-201ENST00000583960 235 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 AF230666.2-201ENST00000602328 725 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC068790.4-201ENST00000602474 263 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 KATNBL1P1-201ENST00000605192 748 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC099494.2-201ENST00000623371 978 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 LINC00216-201ENST00000623548 1126 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC13P31276 AP001029.2-203ENST00000589795 4910 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC13P31276 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC13P31276 AC096656.1-201ENST00000623826 1364 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 AC093591.2-201ENST00000565254 3843 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 LINC01109-201ENST00000603837 3081 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 RNA5SP90-201ENST00000364801 99 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 RNU6-532P-201ENST00000384318 107 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 CHMP1B2P-201ENST00000399581 597 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 MIR1182-201ENST00000408363 97 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC079809.1-201ENST00000415468 276 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 RPL12P28-201ENST00000430852 489 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 AL627224.1-201ENST00000448334 444 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AP002345.1-201ENST00000456493 928 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 PSMC1P13-201ENST00000458195 985 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC093267.1-201ENST00000489176 961 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC13P31276 BTF3P13-201ENST00000513224 490 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC012400.1-201ENST00000518452 381 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC040958.1-201ENST00000561102 201 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC009852.2-201ENST00000567898 485 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 MIR4691-201ENST00000583764 85 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC010200.2-201ENST00000605098 235 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AC012467.1-201ENST00000607740 256 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 AP005432.2-201ENST00000608162 586 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AL627230.1-201ENST00000613077 211 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AL591926.8-201ENST00000616876 211 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 AP000346.3-201ENST00000622821 210 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 AC073869.10-201ENST00000642016 354 ntBASIC5.38□□□□□ -1.55
HOXC13P31276 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXC13P31276 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC13P31276 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC13P31276 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC13P31276 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC13P31276 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
HOXC13P31276 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC13P31276 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC13P31276 Z95327.2-201ENST00000414579 1873 ntBASIC5.37□□□□□ -1.55
HOXC13P31276 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC13P31276 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 OR5T3-201ENST00000303059 1023 ntBASIC5.37□□□□□ -1.55
HOXC13P31276 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC13P31276 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC13P31276 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC13P31276 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms