Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC6.34□□□□□ -1.39
COL8A1P27658 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 AC117409.1-201ENST00000470499 1310 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.34□□□□□ -1.39
COL8A1P27658 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.34□□□□□ -1.39
COL8A1P27658 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL8A1P27658 RNU6-1300P-201ENST00000391046 108 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC068050.1-201ENST00000394891 380 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL049697.2-201ENST00000403708 294 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 GAPDHP42-201ENST00000406848 981 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RPSAP72-201ENST00000407020 358 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RPL6P29-201ENST00000414863 865 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RPL7P10-201ENST00000417407 739 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 NPM1P34-201ENST00000428821 893 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 Z68868.1-201ENST00000429048 544 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC096644.2-201ENST00000429278 159 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 RPS3AP52-201ENST00000435639 297 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC128677.1-201ENST00000436016 442 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 SUMO2P10-201ENST00000452006 288 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RANP1-206ENST00000455094 651 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 RN7SL221P-201ENST00000466190 281 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC091982.1-202ENST00000473923 343 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RN7SL332P-201ENST00000482163 254 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL591122.1-201ENST00000487348 492 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 RN7SL569P-201ENST00000494652 288 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.34□□□□□ -1.39
COL8A1P27658 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.34□□□□□ -1.39
COL8A1P27658 NPM1P41-201ENST00000512920 831 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC011352.2-201ENST00000514574 1016 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.34□□□□□ -1.39
COL8A1P27658 AP000676.2-201ENST00000529711 301 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL8A1P27658 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 MT1CP-201ENST00000567054 174 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 OR1E3-201ENST00000575608 948 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 PPIAP14-201ENST00000577627 496 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC005518.2-201ENST00000603254 282 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC008966.2-201ENST00000606157 453 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 AC098479.1-201ENST00000609225 154 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.34□□□□□ -1.39
COL8A1P27658 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AL161420.1-201ENST00000619393 264 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC087894.3-201ENST00000623682 349 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AL133216.2-202ENST00000634512 349 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC027559.1-201ENST00000636288 271 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 AC140479.4-205ENST00000636339 820 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AL031123.2-201ENST00000563225 3325 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL8A1P27658 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL8A1P27658 AC145138.1-201ENST00000512908 2851 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 MAPK10-319ENST00000641459 2542 ntBASIC6.34□□□□□ -1.39
COL8A1P27658 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL8A1P27658 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL8A1P27658 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL8A1P27658 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COL8A1P27658 OR4G1P-202ENST00000641173 1788 ntBASIC6.34□□□□□ -1.4
COL8A1P27658 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.33□□□□□ -1.4
COL8A1P27658 AC025574.1-201ENST00000554784 1653 ntBASIC6.33□□□□□ -1.4
COL8A1P27658 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.33□□□□□ -1.4
COL8A1P27658 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.33□□□□□ -1.4
COL8A1P27658 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.33□□□□□ -1.4
COL8A1P27658 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL8A1P27658 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms