Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL8A2P25067 RNU4-44P-201ENST00000363050 141 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 SNORD113.2-201ENST00000364166 89 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 SNORA70F-201ENST00000384142 135 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 RN7SKP97-201ENST00000410966 333 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC009480.2-201ENST00000422916 432 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 ARL2BPP10-201ENST00000446487 531 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC079168.2-201ENST00000453977 416 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.98□□□□□ -1.77
COL8A2P25067 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AK3P4-201ENST00000504283 583 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC111000.3-201ENST00000508057 576 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 RFPL4AP5-201ENST00000514977 504 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 OR10D4P-201ENST00000525892 951 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 FKBP1BP1-201ENST00000553366 325 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.98□□□□□ -1.77
COL8A2P25067 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.98□□□□□ -1.77
COL8A2P25067 MIR6798-201ENST00000612887 67 ntBASIC3.98□□□□□ -1.77
COL8A2P25067 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.98□□□□□ -1.77
COL8A2P25067 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL8A2P25067 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL8A2P25067 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.98□□□□□ -1.77
COL8A2P25067 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.98□□□□□ -1.77
COL8A2P25067 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
COL8A2P25067 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL8A2P25067 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL8A2P25067 RPS3AP23-201ENST00000401762 784 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 RN7SKP267-201ENST00000410381 285 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 AC007738.1-201ENST00000413892 348 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 OR13Z1P-201ENST00000416141 834 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 AC140479.3-201ENST00000418944 1126 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 RGS17P1-201ENST00000423358 553 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 RPS26P4-201ENST00000431743 355 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.97□□□□□ -1.77
COL8A2P25067 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.97□□□□□ -1.77
COL8A2P25067 GTF3AP5-201ENST00000442645 697 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.97□□□□□ -1.77
COL8A2P25067 OR52A4P-201ENST00000472867 958 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 RN7SL346P-201ENST00000491561 294 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 CEACAMP10-202ENST00000495431 496 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.97□□□□□ -1.77
COL8A2P25067 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC087477.6-201ENST00000559595 843 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 AC018552.1-201ENST00000562099 811 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 AF230666.2-201ENST00000602328 725 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC093765.1-201ENST00000603758 881 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 AC006453.5-201ENST00000636451 619 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 TMEM30CP-203ENST00000637814 1035 ntBASIC3.97□□□□□ -1.77
COL8A2P25067 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC3.97□□□□□ -1.77
COL8A2P25067 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.97□□□□□ -1.77
COL8A2P25067 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.97□□□□□ -1.77
COL8A2P25067 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL8A2P25067 AP001642.1-201ENST00000624727 2117 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms