Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL139158.1-201ENST00000424719 340 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AL356583.2-201ENST00000426536 280 ntBASIC7.37□□□□□ -1.23
RFX1P22670 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 AC092427.1-201ENST00000439177 601 ntBASIC7.37□□□□□ -1.23
RFX1P22670 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 PMS2P9-201ENST00000441237 515 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC112653.1-201ENST00000443851 386 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 RPL21P6-201ENST00000479171 504 ntBASIC7.37□□□□□ -1.23
RFX1P22670 OR7E99P-201ENST00000505750 922 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC093809.1-201ENST00000509155 340 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 MAST4-IT1-201ENST00000514241 658 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.37□□□□□ -1.23
RFX1P22670 RNA5SP318-201ENST00000516352 92 ntBASIC7.37□□□□□ -1.23
RFX1P22670 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX1P22670 AC121758.1-202ENST00000556917 658 ntBASIC7.37□□□□□ -1.23
RFX1P22670 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 AC018558.5-201ENST00000565840 952 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC004232.1-201ENST00000571388 208 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC141257.3-201ENST00000572906 215 ntBASIC7.37□□□□□ -1.23
RFX1P22670 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.37□□□□□ -1.23
RFX1P22670 PRELID3BP8-201ENST00000604148 295 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AP001506.1-201ENST00000615444 211 ntBASIC7.37□□□□□ -1.23
RFX1P22670 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.37□□□□□ -1.23
RFX1P22670 MIR6823-201ENST00000622118 61 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC005858.3-201ENST00000624756 589 ntBASIC7.37□□□□□ -1.23
RFX1P22670 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 AC096992.2-201ENST00000609553 1684 ntBASIC7.37□□□□□ -1.23
RFX1P22670 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 WDR95P-201ENST00000425638 1542 ntBASIC7.37□□□□□ -1.23
RFX1P22670 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RFX1P22670 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RFX1P22670 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 RNU6-797P-201ENST00000363101 109 ntBASIC7.36□□□□□ -1.23
RFX1P22670 RNU4-12P-201ENST00000365233 139 ntBASIC7.36□□□□□ -1.23
RFX1P22670 SNORA64.3-201ENST00000365647 134 ntBASIC7.36□□□□□ -1.23
RFX1P22670 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 AL353133.1-201ENST00000407695 401 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 USP9YP6-201ENST00000413550 854 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX1P22670 AC234782.4-201ENST00000417646 1048 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC009480.2-201ENST00000422916 432 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX1P22670 RPS26P40-201ENST00000435209 294 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AL450263.2-201ENST00000439400 589 ntBASIC7.36□□□□□ -1.23
RFX1P22670 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 USP9YP34-201ENST00000453983 808 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX1P22670 RPS26P11-201ENST00000463445 348 ntBASIC7.36□□□□□ -1.23
RFX1P22670 RPS26P6-201ENST00000475156 348 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC074386.1-201ENST00000476560 767 ntBASIC7.36□□□□□ -1.23
RFX1P22670 RN7SL568P-201ENST00000493069 298 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX1P22670 RNU6-488P-201ENST00000515918 99 ntBASIC7.36□□□□□ -1.23
RFX1P22670 OR52K3P-201ENST00000531655 943 ntBASIC7.36□□□□□ -1.23
RFX1P22670 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX1P22670 AC017100.2-201ENST00000584628 355 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC011891.2-201ENST00000604949 397 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AL035410.2-201ENST00000604963 864 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 MIR6071-201ENST00000616741 78 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC073592.6-201ENST00000624271 415 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC124864.2-201ENST00000624736 186 ntBASIC7.36□□□□□ -1.23
RFX1P22670 AC068213.1-201ENST00000625124 226 ntBASIC7.36□□□□□ -1.23
RFX1P22670 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX1P22670 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX1P22670 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.36□□□□□ -1.23
RFX1P22670 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RFX1P22670 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms