Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC092490.3-201ENST00000545370 572 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 OR11J2P-201ENST00000555298 907 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC007448.1-201ENST00000582714 234 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AL049844.2-201ENST00000604280 628 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC009032.1-201ENST00000617574 431 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.09□□□□□ -1.6
HLA-DPA1P20036 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 U8.4-201ENST00000363626 134 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 SNORA66-201ENST00000384792 133 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 ATP5HP3-201ENST00000396994 486 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AL589655.1-201ENST00000405398 482 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RN7SKP213-201ENST00000410746 298 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RN7SKP247-201ENST00000411094 308 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC104333.2-201ENST00000422630 192 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AL158073.1-201ENST00000426848 1104 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 BRWD1P3-201ENST00000428816 390 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RPL12P46-201ENST00000436610 195 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RPL35AP21-201ENST00000437667 333 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 OR7E125P-201ENST00000443450 846 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC005229.2-201ENST00000456995 399 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 APOOP2-201ENST00000461561 539 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RPSAP50-201ENST00000481955 852 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 HMGN2P25-201ENST00000486956 268 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 COX6B1P2-201ENST00000489624 230 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 NPM1P28-201ENST00000492269 840 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC093770.1-201ENST00000511559 571 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RNU6-889P-201ENST00000517189 103 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 HMGN2P6-201ENST00000551091 273 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC023158.1-201ENST00000561632 1025 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC116553.2-201ENST00000564203 463 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 DPRXP4-201ENST00000578053 568 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 MIR3691-201ENST00000578066 90 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC105254.2-201ENST00000603636 436 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC090953.1-201ENST00000604305 1092 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC009163.6-201ENST00000612367 342 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC016957.2-201ENST00000616998 848 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 HSPA8P14-201ENST00000552265 1805 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC090971.4-201ENST00000560291 1800 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 AC093591.2-201ENST00000565254 3843 ntBASIC5.08□□□□□ -1.6
HLA-DPA1P20036 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DPA1P20036 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC009229.4-201ENST00000623854 1947 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 LINC01355-201ENST00000566551 5444 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 NEAT1-202ENST00000501122 22743 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 SNORA27.3-201ENST00000364937 134 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 SETP15-201ENST00000412724 337 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 RPL23AP27-201ENST00000415161 451 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms