Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 BNIP3P19-201ENST00000605397 577 ntBASIC6.88□□□□□ -1.31
ATF3P18847 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.88□□□□□ -1.31
ATF3P18847 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.88□□□□□ -1.31
ATF3P18847 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ATF3P18847 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATF3P18847 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.88□□□□□ -1.31
ATF3P18847 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.88□□□□□ -1.31
ATF3P18847 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATF3P18847 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
ATF3P18847 SPATA2P1-201ENST00000431223 2055 ntBASIC6.88□□□□□ -1.31
ATF3P18847 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.88□□□□□ -1.31
ATF3P18847 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.88□□□□□ -1.31
ATF3P18847 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATF3P18847 AL669831.5-218ENST00000591702 1873 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AC097063.1-201ENST00000426714 1797 ntBASIC6.87□□□□□ -1.31
ATF3P18847 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.87□□□□□ -1.31
ATF3P18847 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.87□□□□□ -1.31
ATF3P18847 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 ATP5HP3-201ENST00000396994 486 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AC025750.1-201ENST00000399891 379 ntBASIC6.87□□□□□ -1.31
ATF3P18847 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.87□□□□□ -1.31
ATF3P18847 AC114755.2-201ENST00000413520 361 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AL158073.1-201ENST00000426848 1104 ntBASIC6.87□□□□□ -1.31
ATF3P18847 RPS27AP12-201ENST00000429552 465 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.87□□□□□ -1.31
ATF3P18847 RPS29P9-201ENST00000440360 171 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.87□□□□□ -1.31
ATF3P18847 AC015908.1-201ENST00000478739 476 ntBASIC6.87□□□□□ -1.31
ATF3P18847 SCARNA22-201ENST00000503991 125 ntBASIC6.87□□□□□ -1.31
ATF3P18847 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.87□□□□□ -1.31
ATF3P18847 AC079064.1-201ENST00000528365 362 ntBASIC6.87□□□□□ -1.31
ATF3P18847 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.87□□□□□ -1.31
ATF3P18847 AC108738.1-201ENST00000603703 237 ntBASIC6.87□□□□□ -1.31
ATF3P18847 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.87□□□□□ -1.31
ATF3P18847 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 AC008785.1-201ENST00000624475 456 ntBASIC6.87□□□□□ -1.31
ATF3P18847 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.87□□□□□ -1.31
ATF3P18847 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.87□□□□□ -1.31
ATF3P18847 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ATF3P18847 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATF3P18847 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
ATF3P18847 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 AC006210.2-201ENST00000367074 1545 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.86□□□□□ -1.31
ATF3P18847 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 AC009951.1-201ENST00000623674 2614 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 RAD1P1-201ENST00000231383 813 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RNU1-59P-201ENST00000364829 162 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RNU1-64P-201ENST00000365443 163 ntBASIC6.86□□□□□ -1.31
ATF3P18847 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ATF3P18847 RNU6-31P-201ENST00000384388 108 ntBASIC6.86□□□□□ -1.31
ATF3P18847 SNORA70.10-201ENST00000384515 134 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.86□□□□□ -1.31
ATF3P18847 HMGB3P10-201ENST00000434734 572 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.86□□□□□ -1.31
ATF3P18847 AL353898.1-201ENST00000444055 238 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RPL5P13-201ENST00000462840 709 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC011276.1-201ENST00000469688 323 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC116562.1-201ENST00000485355 781 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC104629.1-201ENST00000494226 508 ntBASIC6.86□□□□□ -1.31
ATF3P18847 SUMO1P1-201ENST00000497904 306 ntBASIC6.86□□□□□ -1.31
ATF3P18847 IGBP1P4-201ENST00000503202 879 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ATF3P18847 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.86□□□□□ -1.31
ATF3P18847 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.86□□□□□ -1.31
ATF3P18847 AC098976.1-201ENST00000513014 541 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RNU6-1102P-201ENST00000516149 96 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.86□□□□□ -1.31
ATF3P18847 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ATF3P18847 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.86□□□□□ -1.31
ATF3P18847 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 AC133555.2-201ENST00000550213 292 ntBASIC6.86□□□□□ -1.31
ATF3P18847 HMGN2P47-201ENST00000559378 272 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC093510.2-201ENST00000562820 896 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC069366.1-201ENST00000583159 838 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATF3P18847 AC093227.2-201ENST00000589357 285 ntBASIC6.86□□□□□ -1.31
ATF3P18847 SNX6P1-201ENST00000601728 1224 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC005776.1-201ENST00000603164 290 ntBASIC6.86□□□□□ -1.31
ATF3P18847 AC007497.1-201ENST00000610421 561 ntBASIC6.86□□□□□ -1.31
ATF3P18847 U1.25-201ENST00000614085 162 ntBASIC6.86□□□□□ -1.31
ATF3P18847 U1.31-201ENST00000620022 160 ntBASIC6.86□□□□□ -1.31
ATF3P18847 RPL23AP61-201ENST00000623642 466 ntBASIC6.86□□□□□ -1.31
ATF3P18847 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.86□□□□□ -1.31
ATF3P18847 AC106858.1-201ENST00000637497 429 ntBASIC6.86□□□□□ -1.31
ATF3P18847 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms