Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AP000619.3-201ENST00000535634 1127 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL121579.2-201ENST00000555466 590 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC011260.1-201ENST00000578420 472 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC015818.6-201ENST00000584274 634 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 U73023.1-201ENST00000603134 700 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC128687.1-201ENST00000605304 619 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL136131.3-201ENST00000607600 188 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC069234.4-201ENST00000621276 412 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC022509.4-201ENST00000621404 572 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC004836.1-201ENST00000623032 634 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC079776.5-201ENST00000641920 211 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL591848.4-201ENST00000567832 3472 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL662795.2-201ENST00000624252 3706 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 OR4G2P-201ENST00000328113 903 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 RN7SKP160-201ENST00000363804 340 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-757P-201ENST00000410334 100 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 UBE2V1P14-201ENST00000415815 558 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC093155.2-201ENST00000420734 937 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AL606662.1-201ENST00000445763 553 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 TPT1P7-201ENST00000458300 517 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 OR4G11P-201ENST00000492842 939 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC096751.1-202ENST00000502691 1067 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC023632.1-201ENST00000518463 375 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 IGKV2-18-201ENST00000522607 343 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC008126.1-201ENST00000549019 480 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC020916.2-201ENST00000591242 360 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC104695.2-201ENST00000605056 775 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AL021918.2-201ENST00000613415 194 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 TSHZ2-205ENST00000626626 670 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC105235.1-201ENST00000623208 1816 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 AC012254.3-201ENST00000591183 2117 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 GTF2H2B-203ENST00000508065 1432 ntBASIC8.12□□□□□ -1.11
CSB-PGBD3P0DP91 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-560P-201ENST00000364007 108 ntBASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 XGY1-201ENST00000381172 446 ntBASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 OR7E101P-201ENST00000400428 513 ntBASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 RNA5SP498-201ENST00000411342 120 ntBASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 RPL34P3-201ENST00000421454 338 ntBASIC8.11□□□□□ -1.11
CSB-PGBD3P0DP91 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms