Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC6P09630 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXC6P09630 CLIC4P2-201ENST00000601934 717 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AL590392.1-201ENST00000604960 446 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AC018754.1-201ENST00000607486 925 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AL445423.1-201ENST00000609941 536 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AC009032.1-201ENST00000617574 431 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 RNA5SP439-201ENST00000617595 124 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC6P09630 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC6P09630 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC6P09630 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC6P09630 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HOXC6P09630 RNU6-386P-201ENST00000362650 107 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 SNORD113.2-201ENST00000364166 89 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 SNORA70.10-201ENST00000384515 134 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXC6P09630 RN7SKP106-201ENST00000410832 272 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC6P09630 CYCSP11-201ENST00000436426 315 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AL450023.3-201ENST00000440592 271 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC6P09630 FCF1P6-201ENST00000456841 595 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC091180.1-201ENST00000462104 372 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC005412.2-201ENST00000492004 341 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC097486.1-201ENST00000515331 210 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 RN7SKP122-201ENST00000515923 296 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC104997.1-201ENST00000519761 717 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 BUD31P1-201ENST00000521828 359 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 OR10D4P-201ENST00000525892 951 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 OR8X1P-201ENST00000534542 869 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 MTCYBP13-201ENST00000578634 1093 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 SS18L2P2-201ENST00000583960 235 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC245884.10-201ENST00000597355 337 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC125494.2-201ENST00000602431 657 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC093765.1-201ENST00000603758 881 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC018695.5-201ENST00000605872 315 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC108359.1-201ENST00000616451 1211 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC016957.2-201ENST00000616998 848 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC009704.2-201ENST00000618739 483 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC048344.4-201ENST00000619744 527 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC068831.8-201ENST00000620171 435 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC6P09630 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC6P09630 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXC6P09630 AC120036.2-201ENST00000509729 1474 ntBASIC5.58□□□□□ -1.52
HOXC6P09630 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
HOXC6P09630 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 ADAM24P-201ENST00000398655 2101 ntBASIC5.57□□□□□ -1.52
HOXC6P09630 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC6P09630 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC6P09630 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HOXC6P09630 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXC6P09630 RNU4-39P-201ENST00000362455 127 ntBASIC5.57□□□□□ -1.52
HOXC6P09630 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC6P09630 U3.30-201ENST00000391308 210 ntBASIC5.57□□□□□ -1.52
HOXC6P09630 CHIAP3-201ENST00000423668 1133 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms