Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL645638.1-201ENST00000440519 361 ntBASIC5.53□□□□□ -1.52
MMP3P08254 TXNP5-201ENST00000441043 315 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AL161722.1-201ENST00000446972 1032 ntBASIC5.53□□□□□ -1.52
MMP3P08254 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 MTND2P6-201ENST00000455337 1030 ntBASIC5.53□□□□□ -1.52
MMP3P08254 BX276092.8-201ENST00000455722 250 ntBASIC5.53□□□□□ -1.52
MMP3P08254 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 CABYRP1-201ENST00000465493 1045 ntBASIC5.53□□□□□ -1.52
MMP3P08254 RN7SL354P-201ENST00000469282 294 ntBASIC5.53□□□□□ -1.52
MMP3P08254 SNRPCP3-201ENST00000474888 476 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AC093663.2-201ENST00000484625 313 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AC116562.1-201ENST00000485355 781 ntBASIC5.53□□□□□ -1.52
MMP3P08254 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 RNU6-319P-201ENST00000516025 108 ntBASIC5.53□□□□□ -1.52
MMP3P08254 RN7SKP276-201ENST00000516242 268 ntBASIC5.53□□□□□ -1.52
MMP3P08254 HMGB1P46-201ENST00000520062 610 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.53□□□□□ -1.52
MMP3P08254 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.53□□□□□ -1.52
MMP3P08254 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
MMP3P08254 OSBPL9P3-201ENST00000534523 595 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.53□□□□□ -1.52
MMP3P08254 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.53□□□□□ -1.52
MMP3P08254 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.53□□□□□ -1.52
MMP3P08254 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 AC023510.2-201ENST00000622162 746 ntBASIC5.53□□□□□ -1.52
MMP3P08254 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.53□□□□□ -1.52
MMP3P08254 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
MMP3P08254 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.53□□□□□ -1.52
MMP3P08254 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
MMP3P08254 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 AL035405.1-201ENST00000400795 710 ntBASIC5.52□□□□□ -1.53
MMP3P08254 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.52□□□□□ -1.53
MMP3P08254 HYALP1-201ENST00000417674 1279 ntBASIC5.52□□□□□ -1.53
MMP3P08254 BX510359.2-201ENST00000417920 305 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC069213.2-201ENST00000420238 366 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.52□□□□□ -1.53
MMP3P08254 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.52□□□□□ -1.53
MMP3P08254 NRBF2P3-201ENST00000432731 865 ntBASIC5.52□□□□□ -1.53
MMP3P08254 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.52□□□□□ -1.53
MMP3P08254 AC004980.3-201ENST00000447046 365 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC234781.3-201ENST00000452540 973 ntBASIC5.52□□□□□ -1.53
MMP3P08254 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
MMP3P08254 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
MMP3P08254 NAMPTP2-201ENST00000505629 1115 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC093720.1-201ENST00000505681 714 ntBASIC5.52□□□□□ -1.53
MMP3P08254 PRELID3BP5-201ENST00000508612 460 ntBASIC5.52□□□□□ -1.53
MMP3P08254 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.52□□□□□ -1.53
MMP3P08254 ASNSP4-201ENST00000511103 447 ntBASIC5.52□□□□□ -1.53
MMP3P08254 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.52□□□□□ -1.53
MMP3P08254 C1GALT1P3-201ENST00000522049 819 ntBASIC5.52□□□□□ -1.53
MMP3P08254 SOX5P1-201ENST00000524155 1127 ntBASIC5.52□□□□□ -1.53
MMP3P08254 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
MMP3P08254 NDUFB4P11-201ENST00000560510 395 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC023158.1-201ENST00000561632 1025 ntBASIC5.52□□□□□ -1.53
MMP3P08254 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.52□□□□□ -1.53
MMP3P08254 AC022884.2-201ENST00000578535 580 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.52□□□□□ -1.53
MMP3P08254 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 AC016597.2-201ENST00000613256 341 ntBASIC5.52□□□□□ -1.53
MMP3P08254 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 AC025016.1-201ENST00000616746 682 ntBASIC5.52□□□□□ -1.53
MMP3P08254 AC125336.1-201ENST00000508893 2827 ntBASIC5.52□□□□□ -1.53
MMP3P08254 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MMP3P08254 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
MMP3P08254 MSL3P1-202ENST00000440028 1468 ntBASIC5.51□□□□□ -1.53
MMP3P08254 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MMP3P08254 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
MMP3P08254 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MMP3P08254 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms