Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 PROS2P-201ENST00000474651 1951 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 RNA5SP397-201ENST00000391323 118 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 OR1F12-201ENST00000402365 945 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 RPL21P91-201ENST00000429231 479 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AL772161.1-201ENST00000439130 476 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC073264.2-201ENST00000448886 166 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC023762.1-201ENST00000603280 584 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 MIR6780A-201ENST00000615089 68 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC005086.4-201ENST00000623065 213 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 AC108751.5-201ENST00000492880 1336 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 CDY3P-201ENST00000454543 1618 ntBASIC4.64□□□□□ -1.67
HLA-DQB2P05538 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 VN2R3P-201ENST00000422626 1412 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 RNA5SP151-201ENST00000365632 117 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 SNORA70F-201ENST00000384142 135 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AL445213.1-201ENST00000412589 747 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 RPL23AP93-201ENST00000440847 484 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AP001781.1-201ENST00000530977 207 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 ADAD1P2-201ENST00000588476 646 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 AC004948.1-201ENST00000609858 672 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 HSPD1P14-201ENST00000432666 1618 ntBASIC4.63□□□□□ -1.67
HLA-DQB2P05538 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DQB2P05538 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC104260.2-201ENST00000623551 3497 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 SNORD113.2-201ENST00000364166 89 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 RNU2-50P-201ENST00000410494 143 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 HSPE1P16-201ENST00000426640 348 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AL513533.1-201ENST00000453728 415 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AP006289.1-201ENST00000538089 277 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 MIR4443-201ENST00000585052 53 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC090181.2-201ENST00000602975 672 ntBASIC4.62□□□□□ -1.67
HLA-DQB2P05538 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms