Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RPS27AP16-201ENST00000492222 470 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 NPM1P41-201ENST00000512920 831 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 RN7SL652P-201ENST00000577769 300 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 AC060780.2-201ENST00000589047 198 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.34□□□□□ -1.72
SPTA1P02549 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPTA1P02549 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SPTA1P02549 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPTA1P02549 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPTA1P02549 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.33□□□□□ -1.72
SPTA1P02549 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 RPL7AP61-201ENST00000443410 636 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 RPS7P7-201ENST00000463499 571 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 PSAT1P4-201ENST00000466500 526 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC108064.1-201ENST00000513791 460 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.33□□□□□ -1.72
SPTA1P02549 AP005205.1-201ENST00000563503 508 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 RN7SL176P-201ENST00000580352 264 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 AL360270.2-201ENST00000562952 5985 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC138907.8-201ENST00000623981 2256 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SPTA1P02549 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPTA1P02549 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SPTA1P02549 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SPTA1P02549 PTMAP2-201ENST00000397627 327 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 RPL23AP59-201ENST00000399415 461 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 NDUFB4P4-201ENST00000404822 243 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 RPS3AP25-201ENST00000411660 793 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 RPS26P38-201ENST00000414476 348 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 TMBIM7P-201ENST00000418074 855 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AC236972.1-201ENST00000433225 199 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.33□□□□□ -1.72
SPTA1P02549 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.33□□□□□ -1.72
SPTA1P02549 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC010476.1-201ENST00000519111 851 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.33□□□□□ -1.72
SPTA1P02549 AC021422.1-201ENST00000621212 473 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AC019206.1-201ENST00000621938 425 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 AC020978.9-201ENST00000624380 1141 ntBASIC4.33□□□□□ -1.72
SPTA1P02549 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SPTA1P02549 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SPTA1P02549 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SPTA1P02549 AC025574.1-201ENST00000554784 1653 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SPTA1P02549 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.32□□□□□ -1.72
SPTA1P02549 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.32□□□□□ -1.72
SPTA1P02549 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.32□□□□□ -1.72
SPTA1P02549 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SPTA1P02549 RNU2-30P-201ENST00000516209 141 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 NPM1P6-201ENST00000521088 871 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 AC084757.4-201ENST00000616350 526 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.32□□□□□ -1.72
SPTA1P02549 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
SPTA1P02549 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 AP002512.4-202ENST00000641599 4530 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.32□□□□□ -1.72
SPTA1P02549 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 AC120036.2-201ENST00000509729 1474 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 ARL4AP5-201ENST00000404372 599 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 HSFY1P1-201ENST00000423928 1178 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 MTCO1P54-201ENST00000430139 712 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 NDUFA5P1-201ENST00000433858 341 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.32□□□□□ -1.72
SPTA1P02549 AC108463.1-201ENST00000450258 347 ntBASIC4.32□□□□□ -1.72
SPTA1P02549 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SPTA1P02549 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms