Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC010132.2-201ENST00000295493 1043 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RNA5SP105-201ENST00000391123 113 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL133388.1-201ENST00000404509 287 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL035696.2-201ENST00000407941 709 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL596448.1-201ENST00000415024 392 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 BMS1P17-202ENST00000416720 316 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 DSTNP5-201ENST00000427921 523 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 MTND6P18-201ENST00000439477 513 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RPL12P11-201ENST00000439970 501 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RPS29P9-201ENST00000440360 171 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC019185.1-201ENST00000442718 389 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC144530.1-201ENST00000452862 555 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RPSAP39-201ENST00000467439 883 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RN7SL717P-201ENST00000478343 297 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC006499.6-201ENST00000511169 607 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RNU6-319P-201ENST00000516025 108 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RNU6-751P-201ENST00000516382 101 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 SEC11B-201ENST00000518383 499 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC015720.2-201ENST00000567709 334 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC104695.2-201ENST00000605056 775 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL135786.2-201ENST00000608422 615 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AL592182.3-201ENST00000642132 3304 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 MTCO1P8-201ENST00000416914 1523 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 OR52B1P-201ENST00000316506 909 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RNU6-618P-201ENST00000363518 112 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RN7SKP59-201ENST00000410520 314 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC244453.4-201ENST00000419150 388 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC013470.3-201ENST00000420252 1194 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 CYCSP6-201ENST00000434498 302 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL390119.1-201ENST00000440329 312 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RPL7L1P1-201ENST00000448259 785 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RPL31P20-201ENST00000449593 360 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC104306.1-201ENST00000449702 371 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RNU6-775P-201ENST00000459318 96 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC107015.1-201ENST00000466902 747 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 RPL7P51-201ENST00000490532 749 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 ATG10-AS1-201ENST00000504846 648 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC008694.2-201ENST00000517591 306 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC090151.1-201ENST00000520784 730 ntBASIC3.62□□□□□ -1.83
HLA-DQA1P01909 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.62□□□□□ -1.83
HLA-DQA1P01909 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms