Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 RNU1-64P-201ENST00000365443 163 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 EI24P3-201ENST00000399046 1062 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 AL158073.1-201ENST00000426848 1104 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AL451062.2-201ENST00000427515 271 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 AC093716.1-201ENST00000435923 377 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AL390879.1-201ENST00000439143 386 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 CALM1P2-201ENST00000452941 448 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 RPL7P32-201ENST00000457119 744 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AC108751.3-201ENST00000461814 1020 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 GAPDHP62-201ENST00000515313 990 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 IGHV3-63-201ENST00000518422 341 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 AC124856.1-201ENST00000600819 896 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AC005377.1-201ENST00000605126 456 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 AP005435.3-201ENST00000531260 3198 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.08□□□□□ -1.6
PDGFBP01127 AP000473.2-201ENST00000602659 1537 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFBP01127 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFBP01127 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFBP01127 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFBP01127 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFBP01127 AC100757.1-201ENST00000616872 1835 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFBP01127 RNU1-74P-201ENST00000384108 171 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 RNU6-564P-201ENST00000410983 104 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 RPL21P108-201ENST00000413857 481 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 LINC01881-201ENST00000416103 412 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 GNG5P5-201ENST00000420444 220 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFBP01127 RPL12P28-201ENST00000430852 489 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.07□□□□□ -1.6
PDGFBP01127 MAPRE1P3-201ENST00000435438 796 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 NOP56P2-201ENST00000447491 769 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 VN1R48P-201ENST00000448149 1036 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFBP01127 AL591363.1-201ENST00000450091 483 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 snoU13.22-201ENST00000459428 104 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 SNORD125-201ENST00000459538 96 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 RPL23AP56-201ENST00000460778 453 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 RN7SL443P-201ENST00000464331 290 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC021205.1-201ENST00000468797 348 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC011276.1-201ENST00000469688 323 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFBP01127 MTND3P6-201ENST00000485242 339 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC020593.1-201ENST00000507399 299 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFBP01127 IMPA1P1-201ENST00000510718 842 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 MTCO1P35-201ENST00000515270 228 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFBP01127 SNORA48.9-201ENST00000516419 162 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC009268.1-201ENST00000561352 1203 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AC002069.2-201ENST00000603580 883 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 AL353729.2-201ENST00000605859 1249 ntBASIC5.07□□□□□ -1.6
PDGFBP01127 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFBP01127 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFBP01127 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PDGFBP01127 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFBP01127 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.06□□□□□ -1.6
PDGFBP01127 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 SNORD113.2-201ENST00000364166 89 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 MIR7-1-201ENST00000384871 110 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 MT-TP-201ENST00000387461 68 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 RNA5SP171-201ENST00000391071 115 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PDGFBP01127 PPIAP9-201ENST00000403866 498 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms