Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 LSM1P1-201ENST00000438629 273 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 DEFA11P-201ENST00000446470 261 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 AC002075.1-201ENST00000457396 676 ntBASIC7.91□□□□□ -1.14
RNF40O75150 MEMO1P3-201ENST00000459811 302 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC234782.3-201ENST00000461229 433 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC087385.2-201ENST00000477729 498 ntBASIC7.91□□□□□ -1.14
RNF40O75150 MRPS35P2-201ENST00000508242 191 ntBASIC7.91□□□□□ -1.14
RNF40O75150 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 SUMO2P7-201ENST00000511179 285 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC021146.1-201ENST00000511202 716 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 RNA5SP96-201ENST00000516041 107 ntBASIC7.91□□□□□ -1.14
RNF40O75150 Vault.3-201ENST00000516676 95 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 OR5D2P-201ENST00000524390 911 ntBASIC7.91□□□□□ -1.14
RNF40O75150 OR5D15P-201ENST00000531671 942 ntBASIC7.91□□□□□ -1.14
RNF40O75150 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.91□□□□□ -1.14
RNF40O75150 AC044860.3-201ENST00000559957 368 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF40O75150 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 AC140658.6-201ENST00000603958 201 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AL022345.1-201ENST00000607292 135 ntBASIC7.91□□□□□ -1.14
RNF40O75150 AC022893.3-201ENST00000607665 437 ntBASIC7.91□□□□□ -1.14
RNF40O75150 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF40O75150 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
RNF40O75150 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF40O75150 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF40O75150 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.9□□□□□ -1.14
RNF40O75150 PSMC1P7-201ENST00000495689 1315 ntBASIC7.9□□□□□ -1.14
RNF40O75150 RNU6-582P-201ENST00000362989 107 ntBASIC7.9□□□□□ -1.14
RNF40O75150 Y_RNA.135-201ENST00000363439 95 ntBASIC7.9□□□□□ -1.14
RNF40O75150 Y_RNA.158-201ENST00000363651 101 ntBASIC7.9□□□□□ -1.14
RNF40O75150 RNU1-11P-201ENST00000383975 164 ntBASIC7.9□□□□□ -1.14
RNF40O75150 SNORD3H-201ENST00000384486 214 ntBASIC7.9□□□□□ -1.14
RNF40O75150 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF40O75150 RN7SKP266-201ENST00000410232 287 ntBASIC7.9□□□□□ -1.14
RNF40O75150 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF40O75150 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 COX6CP17-201ENST00000421389 185 ntBASIC7.9□□□□□ -1.14
RNF40O75150 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 AC006335.2-201ENST00000437993 330 ntBASIC7.9□□□□□ -1.14
RNF40O75150 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF40O75150 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RNF40O75150 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF40O75150 TRGVB-201ENST00000453257 471 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AC078785.3-201ENST00000476607 425 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AC233702.1-201ENST00000482905 502 ntBASIC7.9□□□□□ -1.14
RNF40O75150 NDUFS5P2-201ENST00000484004 306 ntBASIC7.9□□□□□ -1.14
RNF40O75150 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 AC108693.1-201ENST00000496068 432 ntBASIC7.9□□□□□ -1.14
RNF40O75150 MTCO1P29-201ENST00000496868 288 ntBASIC7.9□□□□□ -1.14
RNF40O75150 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF40O75150 AC025674.1-201ENST00000507074 324 ntBASIC7.9□□□□□ -1.14
RNF40O75150 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 AC006499.2-201ENST00000513470 337 ntBASIC7.9□□□□□ -1.14
RNF40O75150 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 NF1P12-201ENST00000549593 583 ntBASIC7.9□□□□□ -1.14
RNF40O75150 COX4I1P1-201ENST00000554239 509 ntBASIC7.9□□□□□ -1.14
RNF40O75150 DNM1P31-201ENST00000564149 696 ntBASIC7.9□□□□□ -1.14
RNF40O75150 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF40O75150 RN7SL473P-201ENST00000580341 299 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF40O75150 TPMTP1-201ENST00000592307 737 ntBASIC7.9□□□□□ -1.14
RNF40O75150 APOOP1-201ENST00000604695 592 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF40O75150 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF40O75150 AC009318.4-201ENST00000620496 486 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AC005899.6-201ENST00000620729 297 ntBASIC7.9□□□□□ -1.14
RNF40O75150 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF40O75150 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms