Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RPL7P51-201ENST00000490532 749 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.74□□□□□ -1.65
LSM1O15116 PGBD4P4-201ENST00000509673 613 ntBASIC4.74□□□□□ -1.65
LSM1O15116 snoU109.6-201ENST00000516831 118 ntBASIC4.74□□□□□ -1.65
LSM1O15116 RN7SKP260-201ENST00000516907 149 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.74□□□□□ -1.65
LSM1O15116 IGKV2-18-201ENST00000522607 343 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC090281.1-201ENST00000523019 276 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.74□□□□□ -1.65
LSM1O15116 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.74□□□□□ -1.65
LSM1O15116 EIF1P5-201ENST00000585002 234 ntBASIC4.74□□□□□ -1.65
LSM1O15116 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.74□□□□□ -1.65
LSM1O15116 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.74□□□□□ -1.65
LSM1O15116 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.74□□□□□ -1.65
LSM1O15116 AC087821.1-201ENST00000623639 567 ntBASIC4.74□□□□□ -1.65
LSM1O15116 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.74□□□□□ -1.65
LSM1O15116 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LSM1O15116 AL049767.1-202ENST00000637826 242 ntBASIC4.74□□□□□ -1.65
LSM1O15116 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LSM1O15116 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
LSM1O15116 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LSM1O15116 AC011266.1-201ENST00000624119 3569 ntBASIC4.74□□□□□ -1.65
LSM1O15116 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LSM1O15116 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.73□□□□□ -1.65
LSM1O15116 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LSM1O15116 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LSM1O15116 RNU6-178P-201ENST00000384631 104 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AP000580.1-201ENST00000404439 358 ntBASIC4.73□□□□□ -1.65
LSM1O15116 EIF4EP1-201ENST00000422311 642 ntBASIC4.73□□□□□ -1.65
LSM1O15116 RGS17P1-201ENST00000423358 553 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.73□□□□□ -1.65
LSM1O15116 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.73□□□□□ -1.65
LSM1O15116 AL035551.1-201ENST00000446931 348 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.73□□□□□ -1.65
LSM1O15116 AL389915.2-201ENST00000454576 441 ntBASIC4.73□□□□□ -1.65
LSM1O15116 SCARNA10-201ENST00000459255 330 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC093270.2-201ENST00000486157 792 ntBASIC4.73□□□□□ -1.65
LSM1O15116 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.73□□□□□ -1.65
LSM1O15116 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LSM1O15116 RNA5SP43-201ENST00000516559 110 ntBASIC4.73□□□□□ -1.65
LSM1O15116 RNU4-18P-201ENST00000516751 149 ntBASIC4.73□□□□□ -1.65
LSM1O15116 Y_RNA.719-201ENST00000517156 106 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.73□□□□□ -1.65
LSM1O15116 NMNAT1P1-201ENST00000554095 876 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.73□□□□□ -1.65
LSM1O15116 MTND2P13-201ENST00000577438 1039 ntBASIC4.73□□□□□ -1.65
LSM1O15116 MIR4310-201ENST00000582950 57 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
LSM1O15116 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.73□□□□□ -1.65
LSM1O15116 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.73□□□□□ -1.65
LSM1O15116 AC005377.1-201ENST00000605126 456 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AL137246.1-201ENST00000607072 977 ntBASIC4.73□□□□□ -1.65
LSM1O15116 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LSM1O15116 AL627230.1-201ENST00000613077 211 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AL591926.8-201ENST00000616876 211 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AC021106.3-201ENST00000623925 531 ntBASIC4.73□□□□□ -1.65
LSM1O15116 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LSM1O15116 NXF4-202ENST00000416098 1465 ntBASIC4.73□□□□□ -1.65
LSM1O15116 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LSM1O15116 AC074029.4-201ENST00000624796 1859 ntBASIC4.73□□□□□ -1.65
LSM1O15116 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LSM1O15116 ASNSP1-201ENST00000518311 1939 ntBASIC4.72□□□□□ -1.65
LSM1O15116 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
LSM1O15116 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 RNA5SP105-201ENST00000391123 113 ntBASIC4.72□□□□□ -1.65
LSM1O15116 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LSM1O15116 AC009302.1-201ENST00000417147 390 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.72□□□□□ -1.65
LSM1O15116 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.72□□□□□ -1.65
LSM1O15116 AC069285.2-201ENST00000440210 275 ntBASIC4.72□□□□□ -1.65
LSM1O15116 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.72□□□□□ -1.65
LSM1O15116 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 AC243772.1-201ENST00000451620 410 ntBASIC4.72□□□□□ -1.65
LSM1O15116 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.72□□□□□ -1.65
LSM1O15116 APOOP2-201ENST00000461561 539 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AC010469.1-201ENST00000463864 576 ntBASIC4.72□□□□□ -1.65
LSM1O15116 SEPT7P6-201ENST00000469999 1143 ntBASIC4.72□□□□□ -1.65
LSM1O15116 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.72□□□□□ -1.65
LSM1O15116 HMGN2P25-201ENST00000486956 268 ntBASIC4.72□□□□□ -1.65
LSM1O15116 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.72□□□□□ -1.65
LSM1O15116 COX6B1P5-201ENST00000509843 249 ntBASIC4.72□□□□□ -1.65
LSM1O15116 CCNHP1-201ENST00000513311 678 ntBASIC4.72□□□□□ -1.65
LSM1O15116 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.72□□□□□ -1.65
LSM1O15116 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.72□□□□□ -1.65
LSM1O15116 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LSM1O15116 OR7E128P-201ENST00000532736 1024 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.72□□□□□ -1.65
LSM1O15116 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AL512329.2-201ENST00000607350 548 ntBASIC4.72□□□□□ -1.65
LSM1O15116 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.72□□□□□ -1.65
LSM1O15116 AC004948.1-201ENST00000609858 672 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms