Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 OR8G5-201ENST00000524943 1041 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 OR10V3P-201ENST00000525712 725 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXN3O00409 LRRC6P1-201ENST00000532188 885 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AP002373.2-201ENST00000541631 1060 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC125612.1-201ENST00000547580 377 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 BLZF2P-201ENST00000553776 1130 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXN3O00409 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 AC004223.2-201ENST00000590309 544 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AP001160.4-201ENST00000596971 382 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC009027.1-201ENST00000604510 479 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC104695.2-201ENST00000605056 775 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AL365400.2-201ENST00000605604 902 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXN3O00409 MIR6861-201ENST00000618657 64 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXN3O00409 AC004232.3-201ENST00000622977 525 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXN3O00409 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXN3O00409 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
FOXN3O00409 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
FOXN3O00409 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXN3O00409 AL603750.1-201ENST00000624216 1717 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 HSPA8P14-201ENST00000552265 1805 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXN3O00409 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 METTL21EP-201ENST00000298105 713 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 MIR133B-201ENST00000362210 119 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 RNA5SP319-201ENST00000362768 119 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 RN7SKP124-201ENST00000364730 341 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
FOXN3O00409 RNU6-932P-201ENST00000391108 106 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 ANAPC10P1-201ENST00000395991 556 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 OR51B3P-201ENST00000412287 913 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.74□□□□□ -1.49
FOXN3O00409 NANOGP5-201ENST00000424456 877 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 NPM1P22-201ENST00000427761 952 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 HSPD1P12-201ENST00000429127 1069 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 AL035551.1-201ENST00000446931 348 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC144530.1-201ENST00000452862 555 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC110749.1-201ENST00000462007 357 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC090602.1-201ENST00000469695 252 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 RPL5P22-201ENST00000480199 884 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.74□□□□□ -1.49
FOXN3O00409 MTATP6P1-201ENST00000514057 681 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AP001207.2-201ENST00000519490 539 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 IGKV2D-10-201ENST00000520194 281 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FOXN3O00409 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AL132857.1-201ENST00000555180 708 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC022404.1-201ENST00000555320 273 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 CYP2C60P-201ENST00000566088 139 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 RPP40P2-201ENST00000603596 712 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.74□□□□□ -1.49
FOXN3O00409 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 AC006946.3-201ENST00000609791 756 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 PART1_2.1-201ENST00000612397 250 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC126175.1-201ENST00000617041 758 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AC109583.2-201ENST00000617367 129 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 AL691477.1-201ENST00000624398 162 ntBASIC5.74□□□□□ -1.49
FOXN3O00409 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
FOXN3O00409 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXN3O00409 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXN3O00409 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
FOXN3O00409 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXN3O00409 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
FOXN3O00409 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms