Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 HCFC2P1-201ENST00000392864 1592 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 AL442639.1-201ENST00000625030 1899 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC007382.1-201ENST00000624376 2618 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 CASC19-204ENST00000641001 2055 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
UPK1AO00322 RNA5SP151-201ENST00000365632 117 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
UPK1AO00322 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.42□□□□□ -1.7
UPK1AO00322 RNU1-82P-201ENST00000390851 165 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 AL645733.1-201ENST00000402250 217 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 OR51B3P-201ENST00000412287 913 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 RPL31P44-201ENST00000447680 377 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 RPL7AP28-201ENST00000464513 571 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 RPL5P16-201ENST00000471467 790 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 RN7SL214P-201ENST00000487317 265 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 AK4P6-201ENST00000505168 528 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC211433.2-201ENST00000608433 387 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 AL353726.1-201ENST00000614041 1000 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
UPK1AO00322 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC131971.1-201ENST00000332881 1482 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.42□□□□□ -1.7
UPK1AO00322 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC105074.1-201ENST00000623380 3095 ntBASIC4.42□□□□□ -1.7
UPK1AO00322 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UPK1AO00322 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
UPK1AO00322 AC112255.1-201ENST00000624070 2493 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1AO00322 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1AO00322 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UPK1AO00322 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UPK1AO00322 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UPK1AO00322 RNA5SP113-201ENST00000410486 84 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 RSU1P3-201ENST00000412878 835 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC004074.1-201ENST00000421810 1063 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 PDSS1P1-201ENST00000422953 1114 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 VN1R54P-201ENST00000435210 1049 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 CYCSP11-201ENST00000436426 315 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 OR1H1P-201ENST00000448731 937 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC079168.2-201ENST00000453977 416 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 ZFRP1-201ENST00000457579 2970 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC063943.1-201ENST00000465434 453 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 NDUFB5P1-201ENST00000508134 564 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.41□□□□□ -1.7
UPK1AO00322 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 AP001880.2-201ENST00000538233 448 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.41□□□□□ -1.7
UPK1AO00322 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 OR1F2P-201ENST00000570470 933 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.41□□□□□ -1.7
UPK1AO00322 AL031320.1-201ENST00000604177 357 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 RNU6-84P-201ENST00000607737 102 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 AC011815.3-201ENST00000624194 473 ntBASIC4.41□□□□□ -1.7
UPK1AO00322 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.41□□□□□ -1.7
UPK1AO00322 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK1AO00322 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPK1AO00322 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UPK1AO00322 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
UPK1AO00322 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
UPK1AO00322 AP000542.2-201ENST00000623199 6179 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms