Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL606834.2-201ENST00000602954 668 ntBASIC4.85□□□□□ -1.63
CGB1A6NKQ9 MIR6823-201ENST00000622118 61 ntBASIC4.85□□□□□ -1.63
CGB1A6NKQ9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 LYARP1-201ENST00000436977 1501 ntBASIC4.85□□□□□ -1.63
CGB1A6NKQ9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 DDX18P4-201ENST00000511690 1966 ntBASIC4.85□□□□□ -1.63
CGB1A6NKQ9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CGB1A6NKQ9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AP000432.2-201ENST00000624164 2048 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RNA5SP375-201ENST00000362975 119 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RNY3P14-201ENST00000384309 102 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 SNORA40.2-201ENST00000390847 128 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 VDAC2P1-201ENST00000399358 958 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RPS3AP24-201ENST00000407896 734 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AP000357.1-201ENST00000409926 1165 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RNA5SP198-201ENST00000410376 127 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RN7SKP108-201ENST00000411367 328 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 ETF1P3-201ENST00000430422 1160 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 USP24P1-201ENST00000433802 779 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RBMX2P4-201ENST00000441256 376 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL591503.2-201ENST00000442314 1005 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC245291.3-201ENST00000443400 292 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL590004.3-202ENST00000445883 451 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL050341.1-201ENST00000447743 313 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RPL7AP52-201ENST00000458096 790 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RPL7AP10-201ENST00000481016 791 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 CBX3P3-201ENST00000508108 532 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 HMGN1P16-201ENST00000508308 283 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC109458.1-201ENST00000508858 316 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 NACAP5-201ENST00000509863 636 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 MTCO3P15-201ENST00000526563 574 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 UBE2NP1-201ENST00000545592 458 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC087883.1-201ENST00000551882 391 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC090826.1-203ENST00000569235 490 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 RN7SL66P-201ENST00000582099 264 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 MIR548Y-201ENST00000582739 110 ntBASIC4.84□□□□□ -1.63
CGB1A6NKQ9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.84□□□□□ -1.63
CGB1A6NKQ9 AC006539.2-201ENST00000601729 572 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms