Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RNA5SP27-201ENST00000363839 119 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 DNAJC19P6-201ENST00000401853 280 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL589647.1-201ENST00000402485 466 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 HNRNPDP2-201ENST00000406475 478 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RN7SKP216-201ENST00000411050 312 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC108075.1-201ENST00000424692 529 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RPS4XP16-201ENST00000427198 791 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC022022.1-201ENST00000430304 178 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 VN1R108P-201ENST00000431580 830 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 GTF2IP3-201ENST00000433887 494 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 VN1R54P-201ENST00000435210 1049 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CACYBPP1-201ENST00000438592 684 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CDY12P-201ENST00000440679 1015 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CDY13P-201ENST00000445813 1015 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL133244.1-201ENST00000456007 258 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 MTCO3P35-201ENST00000485582 781 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC134050.1-201ENST00000495088 933 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC117522.2-201ENST00000510049 657 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 NDUFS5P6-201ENST00000529136 295 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AP000676.2-201ENST00000529711 301 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 OR5D15P-201ENST00000531671 942 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC087897.1-201ENST00000550134 156 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 MIR3691-201ENST00000578066 90 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 MIR4646-201ENST00000580775 63 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 NIFKP6-201ENST00000598115 845 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC113368.1-201ENST00000603736 382 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC080013.6-201ENST00000606185 215 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL049539.1-201ENST00000611964 459 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC090116.1-201ENST00000615679 446 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC112694.2-201ENST00000623697 768 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC010266.2-201ENST00000564741 3255 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
CCDC187A0A096LP49 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 AC103591.2-201ENST00000265259 766 ntBASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 RNU6-666P-201ENST00000363499 107 ntBASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 SNORA67-201ENST00000384423 137 ntBASIC5.3□□□□□ -1.56
CCDC187A0A096LP49 RNA5SP339-201ENST00000390987 122 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms