Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
PCDHB4Q9Y5E5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB4Q9Y5E5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 Y_RNA.192-201ENST00000363977 102 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RNA5SP500-201ENST00000364486 119 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RPL23AP59-201ENST00000399415 461 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 CHMP1B2P-201ENST00000399581 597 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RN7SKP240-201ENST00000410583 375 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 UBE2V1P10-201ENST00000414685 269 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 OR6C64P-201ENST00000419708 825 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 MTCYBP34-201ENST00000439552 670 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC097499.1-201ENST00000444277 208 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RPL12P39-201ENST00000455456 496 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 snoU13.29-201ENST00000459370 104 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC105384.2-201ENST00000508433 640 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 snoZ278.1-201ENST00000517059 112 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 GTF2IP11-201ENST00000526931 420 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC005363.1-201ENST00000530779 351 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC079315.1-201ENST00000602952 623 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AL138895.2-201ENST00000603019 178 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AL592148.2-201ENST00000612210 372 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC004223.4-201ENST00000612426 332 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 FRG1HP-204ENST00000617940 757 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AL359757.1-201ENST00000623176 255 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC010435.1-201ENST00000623353 1177 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AL359740.1-201ENST00000624340 592 ntBASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB4Q9Y5E5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RNU6-549P-201ENST00000384433 107 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 MIR1203-201ENST00000408812 85 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 Y_RNA.604-201ENST00000410574 102 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC027644.1-201ENST00000419595 298 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 RPA2P2-201ENST00000419698 796 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 REREP1Y-201ENST00000422655 198 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 KRT8P51-201ENST00000438938 274 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 REREP2Y-201ENST00000439103 200 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 MTCYBP3-201ENST00000445588 1137 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 HLA-DPA3-207ENST00000454398 229 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC011979.1-201ENST00000472300 483 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC092045.1-201ENST00000495716 1231 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC021146.8-201ENST00000507455 733 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AC006499.4-201ENST00000510947 694 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 HIGD1AP18-201ENST00000520730 278 ntBASIC6.2□□□□□ -1.42
PCDHB4Q9Y5E5 AL121766.1-201ENST00000547436 487 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms