Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 TATDN1P1-201ENST00000414123 891 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 RPS11P7-201ENST00000442125 465 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 RPL6P5-201ENST00000445678 828 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC002553.2-201ENST00000453217 340 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC090602.1-201ENST00000469695 252 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC010486.2-201ENST00000505572 483 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 RPS27AP18-201ENST00000515536 459 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC005034.4-201ENST00000603612 899 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC025588.2-201ENST00000604851 466 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL122125.1-201ENST00000616999 600 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC098679.4-201ENST00000624241 654 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 BX649567.1-201ENST00000642071 1134 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 VPS35P1-201ENST00000563400 1518 ntBASIC6.4□□□□□ -1.39
CTDP1Q9Y5B0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 Y_RNA.318-201ENST00000365131 97 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 RNF10P1-201ENST00000418589 369 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 MTND2P18-201ENST00000419962 1030 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AL139148.1-201ENST00000427122 680 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 TPTE2P5-203ENST00000458118 728 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 PRDX3P4-201ENST00000470828 747 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 RPL15P21-201ENST00000495592 567 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC067904.2-201ENST00000517322 1283 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC010620.1-201ENST00000601088 1102 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 Z82195.1-201ENST00000604558 398 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC037198.3-201ENST00000616754 526 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC018445.2-201ENST00000622987 260 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 AC109780.1-201ENST00000451768 1344 ntBASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTDP1Q9Y5B0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTDP1Q9Y5B0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms