Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KCNIP3Q9Y2W7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.15□□□□□ -1.75
KCNIP3Q9Y2W7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KCNIP3Q9Y2W7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AL672167.1-205ENST00000641112 3080 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC023490.2-201ENST00000359859 470 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RNU6-225P-201ENST00000384613 103 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SKP222-201ENST00000410651 315 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RPL21P108-201ENST00000413857 481 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 CEACAMP8-201ENST00000413902 580 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC009302.1-201ENST00000417147 390 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC093155.2-201ENST00000420734 937 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AL590609.2-201ENST00000421430 368 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC066692.1-201ENST00000421721 457 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC099336.2-201ENST00000422457 254 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RNF19BPX-201ENST00000426224 625 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RPS4XP16-201ENST00000427198 791 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC110602.1-201ENST00000437414 318 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 FHP1-201ENST00000442741 703 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC099063.2-201ENST00000446360 662 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RHEBP2-201ENST00000450289 600 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC099560.2-201ENST00000457554 255 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RPL7AP52-201ENST00000458096 790 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SL799P-201ENST00000475891 298 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 SIAH1P1-201ENST00000479411 923 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC093270.2-201ENST00000486157 792 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SL558P-201ENST00000497468 299 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC138866.2-201ENST00000508650 584 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RNA5SP373-201ENST00000517271 95 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 TRIM77BP-201ENST00000524985 1119 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RBM22P1-201ENST00000578589 1214 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC016911.1-201ENST00000613297 452 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AC090181.3-201ENST00000624777 1514 ntBASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCNIP3Q9Y2W7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC074029.4-201ENST00000624796 1859 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 MIR421-201ENST00000365696 85 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 MIR600-201ENST00000385007 98 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 HSPD1P16-201ENST00000402302 394 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL596448.1-201ENST00000415024 392 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 EIF4EP1-201ENST00000422311 642 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 FAM96AP1-201ENST00000430879 482 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC073052.1-201ENST00000440417 714 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL450023.3-201ENST00000440592 271 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms