Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC107399.1-201ENST00000451226 265 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 MIR2053-201ENST00000459295 91 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 RPS20P21-201ENST00000466859 343 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 TECRP2-201ENST00000503270 928 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC104184.1-201ENST00000607513 721 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC091953.5-201ENST00000622919 233 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC011815.3-201ENST00000624194 473 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 DBF4P1-201ENST00000412976 1892 ntBASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
TRIM35Q9UPQ4 AC005614.1-201ENST00000598952 3653 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 MFSD8-218ENST00000641186 4448 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC132219.2-201ENST00000624416 2327 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 RNU6-1115P-201ENST00000362490 106 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 RN7SKP257-201ENST00000364525 309 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.396-201ENST00000383949 103 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 MIR27A-201ENST00000385073 78 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AL445529.1-201ENST00000398713 389 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC127391.1-201ENST00000411737 98 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AP000534.2-201ENST00000412729 568 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC092809.1-201ENST00000441469 474 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AL157827.1-201ENST00000447622 132 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 RPL30P15-201ENST00000457129 321 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 SSX8-201ENST00000506270 579 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 POU5F1P7-201ENST00000508759 541 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 Vault.3-201ENST00000516676 95 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 RN7SL426P-201ENST00000579106 295 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC063962.1-201ENST00000608199 521 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AL133173.2-201ENST00000614270 90 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC005899.7-201ENST00000618199 588 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AL161420.1-201ENST00000619393 264 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC027506.1-201ENST00000621395 198 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 AC006453.3-201ENST00000635891 377 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 HCG18-244ENST00000602516 2890 ntBASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM35Q9UPQ4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms