Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 MIR4675-201ENST00000577898 77 ntBASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 AC087468.1-201ENST00000604365 630 ntBASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.83□□□□□ -1.48
CTNNA3Q9UI47 AP000542.2-201ENST00000623199 6179 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC093414.1-201ENST00000434712 514 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC092447.2-201ENST00000435487 669 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 OR11I1P-201ENST00000486033 954 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC110775.1-201ENST00000513721 462 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AP002981.1-201ENST00000517692 975 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC005000.1-201ENST00000536192 288 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC137768.1-201ENST00000549998 553 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC020910.3-201ENST00000603701 874 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC015914.2-201ENST00000618167 288 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 AC009643.2-201ENST00000603543 1448 ntBASIC5.82□□□□□ -1.48
CTNNA3Q9UI47 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AP001273.1-201ENST00000624493 3152 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 SNORA51.8-201ENST00000384234 132 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 MIR192-201ENST00000384915 110 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 OR2AM1P-201ENST00000422137 422 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL591363.1-201ENST00000450091 483 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AP002371.1-201ENST00000463604 433 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC107015.1-201ENST00000466902 747 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC105233.1-201ENST00000498840 781 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 HMGB3P16-201ENST00000508037 287 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 RNA5SP249-201ENST00000516127 99 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 RNA5SP392-201ENST00000516905 112 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 GCSHP4-201ENST00000538792 439 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 BNIP3P1-201ENST00000547295 580 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC079075.1-201ENST00000559543 878 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL161912.3-201ENST00000605404 628 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AL121932.1-201ENST00000605542 214 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC096586.2-201ENST00000610260 441 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AP003072.5-201ENST00000623872 773 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 RBPJP2-201ENST00000618187 1444 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 SMG1P6-201ENST00000532337 2930 ntBASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CTNNA3Q9UI47 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 DDX18P5-201ENST00000534547 1306 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 AL356967.1-201ENST00000406305 431 ntBASIC5.8□□□□□ -1.48
CTNNA3Q9UI47 RNA5SP296-201ENST00000410523 111 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms