Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 SNORA56-201ENST00000383966 129 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC013442.1-201ENST00000397347 228 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC234781.4-201ENST00000419384 244 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 HMGB1P32-201ENST00000425971 565 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 OR2B7P-201ENST00000429302 934 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AL359265.2-201ENST00000434367 631 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC005154.2-201ENST00000438110 379 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 CYCSP24-201ENST00000445119 316 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC239798.3-201ENST00000454459 408 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC008897.1-201ENST00000494006 347 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AL049839.1-201ENST00000556151 657 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC234771.5-201ENST00000600161 514 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 FAM27B-201ENST00000610601 213 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 uc_338.18-201ENST00000615451 175 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 SMG1P6-201ENST00000532337 2930 ntBASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCF1Q9UBD9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC079741.1-201ENST00000321498 212 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC240504.1-201ENST00000395709 845 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 SETP15-201ENST00000412724 337 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC245028.1-201ENST00000423259 256 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 UBE2V2P3-201ENST00000433562 437 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC011753.3-201ENST00000443436 406 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 MRPL35P2-201ENST00000448009 511 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 RPL5P22-201ENST00000480199 884 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC073073.1-201ENST00000493920 463 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 MYL12BP2-201ENST00000503948 512 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 ENPP7P9-201ENST00000514456 627 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AP006289.1-201ENST00000538089 277 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AGGF1P9-201ENST00000561884 913 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 RN7SL802P-201ENST00000577858 299 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 DPRXP4-201ENST00000578053 568 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC022726.1-201ENST00000587475 207 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC009303.3-201ENST00000591103 736 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC098935.2-201ENST00000604222 466 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AL121932.1-201ENST00000605542 214 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AL133406.3-201ENST00000606817 541 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC117490.2-201ENST00000610042 594 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 AC073136.1-201ENST00000449426 2884 ntBASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCF1Q9UBD9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 MIR298-201ENST00000401212 88 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RPS4XP9-201ENST00000405151 780 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 Y_RNA.625-201ENST00000411256 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms