Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 NUDT19P3-201ENST00000404698 555 ntBASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AF186996.5-201ENST00000418098 904 ntBASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AC015912.2-201ENST00000571053 181 ntBASIC4.49□□□□□ -1.69
CCDC88CQ9P219 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 SMG1P4-204ENST00000523028 4131 ntBASIC4.49□□□□□ -1.69
CCDC88CQ9P219 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 RN7SKP267-201ENST00000410381 285 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 BX510359.2-201ENST00000417920 305 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AL513533.1-201ENST00000453728 415 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 RN7SL517P-201ENST00000462240 305 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC006463.2-201ENST00000473326 348 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 STRADBP1-201ENST00000478954 1281 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 IGKV1-32-201ENST00000519290 311 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC006272.2-201ENST00000594725 163 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC097461.1-201ENST00000568928 2821 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 RNU6-398P-201ENST00000384143 109 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 CNOT7P1-201ENST00000429006 852 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC108751.2-201ENST00000469993 231 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC138701.1-201ENST00000524329 714 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 MIR5096-201ENST00000583713 70 ntBASIC4.48□□□□□ -1.69
CCDC88CQ9P219 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC88CQ9P219 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 PCAT14-202ENST00000627127 3935 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 RNU1-32P-201ENST00000363937 159 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 U3.22-201ENST00000391120 215 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 Z97832.1-201ENST00000402490 328 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 CHIAP3-201ENST00000423668 1133 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 DNAJC19P7-201ENST00000428811 344 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 SOX5P1-201ENST00000524155 1127 ntBASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC88CQ9P219 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms