Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC019131.2-201ENST00000609071 870 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF3Q9HD45 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 PCAT14-202ENST00000627127 3935 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC123912.3-201ENST00000600907 1367 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 SDAD1P1-202ENST00000524156 2051 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC008079.2-201ENST00000623543 20396 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AP000756.2-201ENST00000624168 2567 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 RNA5SP223-201ENST00000365174 120 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 MIR589-201ENST00000385238 99 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 RPS4XP9-201ENST00000405151 780 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 OR13Z1P-201ENST00000416141 834 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC019050.1-201ENST00000418508 492 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC090018.1-201ENST00000434369 367 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AL157385.1-201ENST00000446973 268 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 NOP56P2-201ENST00000447491 769 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 CLIC4P1-201ENST00000453177 535 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 RNA5SP103-201ENST00000459503 118 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC006349.1-201ENST00000555526 235 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 UBE2FP2-201ENST00000566646 462 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC233702.9-201ENST00000581528 203 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC011626.1-201ENST00000604710 562 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 MIR378J-201ENST00000611988 109 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 AC093535.2-201ENST00000624769 2326 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.05□□□□□ -1.6
TM9SF3Q9HD45 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 RNU6-398P-201ENST00000384143 109 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AL359643.1-201ENST00000404109 423 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 OR6K4P-201ENST00000423179 955 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AL353597.2-202ENST00000434901 373 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 OR52J1P-201ENST00000450596 932 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 RN7SL319P-201ENST00000480656 221 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 RN7SL459P-201ENST00000481078 302 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 RN7SL346P-201ENST00000491561 294 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC010350.1-201ENST00000504908 231 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC007620.3-201ENST00000608131 497 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AC244517.3-201ENST00000616254 1235 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 AP000346.3-201ENST00000622821 210 ntBASIC5.04□□□□□ -1.6
TM9SF3Q9HD45 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms