Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC130352.1-201ENST00000602979 661 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC006363.1-201ENST00000603806 463 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 OR52H1-202ENST00000641796 1061 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AC006065.1-201ENST00000422539 802 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AC073143.1-201ENST00000436316 395 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 RPL36AP41-201ENST00000493820 306 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AL121932.1-201ENST00000605542 214 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AC022106.2-201ENST00000620114 757 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AP000843.1-201ENST00000624880 701 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 AL391684.1-202ENST00000641293 1636 ntBASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
KIAA1549Q9HCM3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 RPS3AP23-201ENST00000401762 784 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC011276.1-201ENST00000469688 323 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 RN7SL558P-201ENST00000497468 299 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AK4P6-201ENST00000505168 528 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC034205.1-201ENST00000520621 638 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AP001781.1-201ENST00000530977 207 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 OOSP1P2-201ENST00000579644 351 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC114781.5-201ENST00000615297 108 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC015804.1-201ENST00000622935 435 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC021106.3-201ENST00000623925 531 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 SCARNA15-201ENST00000607520 4325 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 RNU4-25P-201ENST00000410569 230 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 RPEP3-201ENST00000425462 676 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 TPT1P1-201ENST00000458495 518 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 OR11I1P-201ENST00000486033 954 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC093267.1-201ENST00000489176 961 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC068831.4-201ENST00000556118 109 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AC115286.1-201ENST00000604298 434 ntBASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
KIAA1549Q9HCM3 AL031119.1-201ENST00000404707 1879 ntBASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KIAA1549Q9HCM3 RNU1-63P-201ENST00000383902 164 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms