Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 DCAF13P2-201ENST00000514188 555 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 SMURF2P1-201ENST00000514992 481 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 RNU6-1004P-201ENST00000516584 111 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SKP256-201ENST00000517201 314 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 COPS8P3-201ENST00000526024 482 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AL137100.2-201ENST00000555786 315 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC110994.2-201ENST00000635481 492 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AC135068.12-201ENST00000637370 931 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 AL359091.1-201ENST00000449048 1734 ntBASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTNAP3Q9BZ76 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AL355974.1-201ENST00000618896 1708 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 PTER-203ENST00000423462 3212 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 MTND5P6-201ENST00000422338 1798 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 RNA5SP238-201ENST00000365464 120 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 SNORD3H-201ENST00000384486 214 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AHCYP8-201ENST00000425108 209 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AP001324.1-201ENST00000428553 399 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AL606490.1-201ENST00000452266 765 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC002075.1-201ENST00000457396 676 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC108688.1-201ENST00000485817 713 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SL284P-201ENST00000498823 275 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 HMGB3P17-201ENST00000504195 649 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC079598.4-201ENST00000549647 265 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 GTF2IP8-201ENST00000560687 584 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 MIR4680-201ENST00000580906 66 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 DISC2.1-201ENST00000612827 205 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 AC123769.2-201ENST00000624332 5984 ntBASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTNAP3Q9BZ76 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms