Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RN7SKP151-201ENST00000410230 316 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RNU6-920P-201ENST00000410926 92 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 CEACAMP8-201ENST00000413902 580 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC096638.2-201ENST00000434965 711 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TAF9P1-201ENST00000445421 515 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TAF9P2-201ENST00000454958 515 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RPS4XP12-201ENST00000461747 709 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RN7SL413P-201ENST00000482700 297 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL035690.1-201ENST00000490892 383 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 UBA52P3-201ENST00000491303 382 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 ATP1B1P1-201ENST00000509767 915 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL390198.2-201ENST00000510553 222 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC106800.3-201ENST00000511389 308 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC008429.4-201ENST00000521201 182 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC007115.1-201ENST00000546853 234 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RN7SL230P-201ENST00000580835 303 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC093388.1-201ENST00000609166 430 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC243756.2-201ENST00000618406 463 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 MIR6861-201ENST00000618657 64 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC069234.4-201ENST00000621276 412 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC096921.2-201ENST00000561507 1916 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 PWAR1-201ENST00000624188 2414 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TRIM51GP-201ENST00000534741 1350 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL121839.2-201ENST00000565058 6943 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 NCLP2-201ENST00000416078 1462 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC009313.2-201ENST00000417893 1941 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL390237.1-201ENST00000404226 1415 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL096800.1-201ENST00000405326 893 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL136133.1-201ENST00000413694 376 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL929472.1-201ENST00000417484 429 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC092651.1-201ENST00000426110 312 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC079807.1-201ENST00000429993 481 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC125238.2-201ENST00000430003 1440 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 MTND2P40-201ENST00000436718 841 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 FHP1-201ENST00000442741 703 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF619P1-201ENST00000446539 752 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC016724.1-201ENST00000453215 421 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 RPS27AP3-201ENST00000453803 454 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 MTCO3P16-201ENST00000454456 754 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC021006.1-201ENST00000489849 553 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC112484.3-201ENST00000505910 329 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 HMGN1P16-201ENST00000508308 283 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC018797.1-201ENST00000510791 255 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms